| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1485 |
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| Symbol | |
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| ID | 7973083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1605760 |
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| End bp | 1606833 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644792083 |
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| Product | Opine dehydrogenase |
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| Protein accession | YP_002943402 |
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| Protein GI | 239814492 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.319845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTG CGATTCTTGG TGGTGGCCAC GGCGCCTATG CGGCCGCCGC GGACCTGTCC
GAAGCCGGCC ATGAGGTGCG CCTGTGGCGC CGCGATGCGG CTGCGCTCGA GCCGGTGGTG
CAGGCCGGCG CCATCACGCT GAAGGACGCC GATGGCGCGC GCGAGGTGCC GCTGGCACTG
GCCACCGCCG ACATCGCCGC GGCGCTCCGG GGCGCCGAGC TCATCGTCAT TCCCACGCCC
GCCATCGCCC AGCACGACAT CGCGCTGGCC ATGGCGCCGC ACCTGGCCGA CGGCCAGGTC
GTCTTCCTGC CGCCGGGCAC CTTCGGCAGC TATGTGATGG CCAGGACGGT GAAGCAGGCC
GGCAGCCGCG CCGACGTGGC CTGGGCCGAG ACCGGCACCT TGCCGTACCT CGCGCGCAAG
CATGGCGAGC GCGAGGTGAA CGTCACGATC CGCGCCATCC GCCTGCCGAC CGGCGTCTAC
CCGGCGCGCA AGGAGGCCGA GTCCATCGAG CTGATCCGCC GCGCCTACCC GGCGGTGCAT
GGCTGCGGCA ATGCGCTTTC AGGCGCGCTC ATGAACGCCG GCCCGGTCAT CCACCCGCCG
CTGATGGTGA TGAATGCCGC GCCGCTGCAG CACTTCGAGC GCTGGGACAT CCACAACGAA
GGCACGCAGC GGGCCGTGCG CGACGTGACC GACCGGCTCG ACCAGGAGCG CATGGCCGTG
CGCGAAGCCT TCGGGCAGCG CGCGCCGCAC TATCCGCTGG CCGACCACTA CAACAACGAC
CAGTGGATGT ACGGCGACGC GCACAAGCAG CTCGTCAAGT CGGGCGACTG GCGCGAGAAC
ATCGACCTGC ACACGCACCG CTACATCACC GAGGACACCG AACTCGGCCT CGCCTTCCTG
GCCTCGGCCG CACGCCATGC GGGGGTGGAC ACACCCATCG CGCACGGCCT GCTGGCGATC
GTCGGCGGCT TTCTCGGCCG CGACCTGCGC CGTGGTCCGC GCACTTTCGA AAGCCTGGGC
CTGGCCGACC TGAGCGCGGC GCAGCTCGAA GAGAGGCTGC ACGATGGCGA ATGA
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| Protein sequence | MKIAILGGGH GAYAAAADLS EAGHEVRLWR RDAAALEPVV QAGAITLKDA DGAREVPLAL
ATADIAAALR GAELIVIPTP AIAQHDIALA MAPHLADGQV VFLPPGTFGS YVMARTVKQA
GSRADVAWAE TGTLPYLARK HGEREVNVTI RAIRLPTGVY PARKEAESIE LIRRAYPAVH
GCGNALSGAL MNAGPVIHPP LMVMNAAPLQ HFERWDIHNE GTQRAVRDVT DRLDQERMAV
REAFGQRAPH YPLADHYNND QWMYGDAHKQ LVKSGDWREN IDLHTHRYIT EDTELGLAFL
ASAARHAGVD TPIAHGLLAI VGGFLGRDLR RGPRTFESLG LADLSAAQLE ERLHDGE
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