| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1469 |
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| Symbol | |
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| ID | 7973067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1592177 |
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| End bp | 1592821 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644792067 |
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| Product | protein of unknown function DUF47 |
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| Protein accession | YP_002943386 |
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| Protein GI | 239814476 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1392] Phosphate transport regulator (distant homolog of PhoU) |
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| TIGRFAM ID | [TIGR00153] conserved hypothetical protein TIGR00153 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGGCA AGCTGCTGCC CCGCGAGGGG AATTTTTTCG AGATGTTCAA CCAGCACGCC
GAGCGCATCG TCGAAGCGGC GCGGGCGTTC GAGCAACTCG TGGCCAATTA CAGCGACGTG
CACCTGCGCG AGCAGTACAA CCGCGACGTC GACAATGCCG AGCGTGCGGC CGACCGCGTC
ACGCATGACG TCAACCGGCT GATCCACAAG ACCTTCATCA CGCCGATCGA CCGCGAGCAG
ATCCACAAGC TCATCAACAC CATGGACGAC GTGGCCGACC TGATCCAGGA CTCGGCCGAG
ACCATGGCGC TGTACGACGT GCGCCACATG ACCGACGAGA TCGTGCGCCT CACGGCGCTG
AGCGTGAAGT GCTGCGACCG CCTGAAGGAC GCCGTCAAGT TCCTCGGCAA GATCGCCGAC
CCGGCGGTGG CCGAGGCCAC GCTCAAGACC TGCGAGGAAA TCGACCGCCT CGAATCGGAC
GCCGACCGCG TGATGCGCAG CGCCATGAGC AAGCTGTTCC GCGAGGAGCC CGACGTGCGC
GAGGTGATCA AGCTCAAGGC AATCTACGAA TTGCTCGAGA CGATCACCGA CAAGTGCGAG
GACGTGGCCA ACGTCATCGA GGGCATCGTC CTCGAGAATT CCTGA
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| Protein sequence | MFGKLLPREG NFFEMFNQHA ERIVEAARAF EQLVANYSDV HLREQYNRDV DNAERAADRV
THDVNRLIHK TFITPIDREQ IHKLINTMDD VADLIQDSAE TMALYDVRHM TDEIVRLTAL
SVKCCDRLKD AVKFLGKIAD PAVAEATLKT CEEIDRLESD ADRVMRSAMS KLFREEPDVR
EVIKLKAIYE LLETITDKCE DVANVIEGIV LENS
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