Gene Vapar_1450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1450 
Symbol 
ID7971278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1575740 
End bp1576048 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content71% 
IMG OID644792048 
Productprotein of unknown function UPF0153 
Protein accessionYP_002943367 
Protein GI239814457 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCCATT GCCAGCAATG CGGCGCCTGC TGCGCCAGCT ACCGCGTCGA CTTCAGCATC 
CATGAACTCG ACGACAACGG CGGCAAGGTG CCATCCGGCC TTGCGGTTGA CGTGAACGGC
ACCCTCTGCC GCATGCGCGG CACCGACCAC ACGCCGCCGC GCTGCGCGGC GCTCACCGGC
AAGATCGGCC AGGCCGTGGC CTGCGGCATC TACGAATGGC GCCCCAACCC CTGCCATGAG
CTGCAGGCCG GCAGCGGCGC CTGCGAGCGG GCCCGTGCGC GCCATGGGCT GCCGGGGCTG
CCTTCCTGA
 
Protein sequence
MSHCQQCGAC CASYRVDFSI HELDDNGGKV PSGLAVDVNG TLCRMRGTDH TPPRCAALTG 
KIGQAVACGI YEWRPNPCHE LQAGSGACER ARARHGLPGL PS