Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1450 |
Symbol | |
ID | 7971278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1575740 |
End bp | 1576048 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644792048 |
Product | protein of unknown function UPF0153 |
Protein accession | YP_002943367 |
Protein GI | 239814457 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCCATT GCCAGCAATG CGGCGCCTGC TGCGCCAGCT ACCGCGTCGA CTTCAGCATC CATGAACTCG ACGACAACGG CGGCAAGGTG CCATCCGGCC TTGCGGTTGA CGTGAACGGC ACCCTCTGCC GCATGCGCGG CACCGACCAC ACGCCGCCGC GCTGCGCGGC GCTCACCGGC AAGATCGGCC AGGCCGTGGC CTGCGGCATC TACGAATGGC GCCCCAACCC CTGCCATGAG CTGCAGGCCG GCAGCGGCGC CTGCGAGCGG GCCCGTGCGC GCCATGGGCT GCCGGGGCTG CCTTCCTGA
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Protein sequence | MSHCQQCGAC CASYRVDFSI HELDDNGGKV PSGLAVDVNG TLCRMRGTDH TPPRCAALTG KIGQAVACGI YEWRPNPCHE LQAGSGACER ARARHGLPGL PS
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