Gene Vapar_1449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1449 
Symbol 
ID7971277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp1575006 
End bp1575659 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content70% 
IMG OID644792047 
Productarylformamidase 
Protein accessionYP_002943366 
Protein GI239814456 
COG category[R] General function prediction only 
COG ID[COG1878] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR03035] arylformamidase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.898188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTCCC TGCAACCCCA ACTCCGCCTC TGGGACATCT CGCCGCCCGT GCATGAAGGC 
ACGCCGGTGT TCCCCGGCGA CACGCCCTAC CAGCAGCGCT GGGCCGCGAC CATATCGCCC 
GACTGCCCGG TCAACGTCAG CGAGATCAAG CTCTCGCCGC ACATCGGCGC GCATGCCGAT 
GCGCCGCTGC ACTACGACCC CGAAGGGCGC CCCATCGGCC TTGTCGACCT TGCGCCCTTC 
CTCGGCCCGT GCCGGGTGAT CCACGCCATT GCCAAGGGGC CGCTGATCGA GTGGGAGCAC 
ATCGCGCATG CCGTCACGAG CCAGATGCCG CAGCGCGTGC TCGTGCGCAC CTATGCCGCC 
ATGCCCGTCG GGCATTGGGA CCCGCAGCTC GCGGCCTACG CGCCCGCCAC GGTCGAGCGG 
CTCGCGGCCA TGGGCGTGAA GCTCATCGGC ATCGACACCG CCAGCATCGA CCCGGCCGAC 
AGCAAGACGC TGGAAAGCCA CCAGCGCATC CGCCGCCTCG ACCTGCGCGT GCTCGAGAAC 
CTCGTGCTCG ACGAGGTGCC CGAGGGCGAC TACGAACTCA TCGCGCTGCC GCTCAAGCTG 
GTCAGCGCCG ATGCCTCCCC GGTTCGCGCC GTGCTGCGCG AGCTTCCCCG CTGA
 
Protein sequence
MRSLQPQLRL WDISPPVHEG TPVFPGDTPY QQRWAATISP DCPVNVSEIK LSPHIGAHAD 
APLHYDPEGR PIGLVDLAPF LGPCRVIHAI AKGPLIEWEH IAHAVTSQMP QRVLVRTYAA 
MPVGHWDPQL AAYAPATVER LAAMGVKLIG IDTASIDPAD SKTLESHQRI RRLDLRVLEN 
LVLDEVPEGD YELIALPLKL VSADASPVRA VLRELPR