| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1414 |
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| Symbol | trpA |
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| ID | 7971242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1535486 |
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| End bp | 1536343 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792012 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_002943331 |
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| Protein GI | 239814421 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGGGCCC GCGCTGGCCG CATTGCCGCC ACCTTCGACG CGCTGAAAAA AGACGGCCGC
CGCGCCCTGA TTCCCTACGT CACCGCCGGC TTCCCCTTCG CCGACATCAC GCCGGAGCTG
ATGCACGGCA TGGTCGAGGC CGGCGCCGAC GTGATCGAGC TCGGCGTGCC GTTCTCCGAC
CCGATGGCCG ATGGCCCGGT GATCCAGAAG GCCGGCGAGG CCGCGCTGGC GCTGGGCGTC
GGCATGAAGC AGGTGCTCGC CATGGTGGCC GCCTTCCGCC AGAAGGACGC GGCGACGCCC
GTGGTGCTGA TGGGCTATGC GAACCCGGTC GAGCGCTACG ACCTCGTGCA TGGCAAGAAG
GCCTTCATCC GCGATGCGTC GGCTGCAGGC GTCGACGGCC TGCTGGTGGT CGACTACCCG
CCCGAGGAAT GCGAGGCTTT CGCCGCCGAC CTCAAGGCGG CGGGCATCGA CCTGATCTTT
CTGCTCGCCC CCACCAGCAC CAGCGAGCGC ATGGCGCAGG TCGCGCGCAC CGCCAGCGGC
TATGTCTACT ACGTGTCGCT CAAGGGCGTG ACGGGCGCCG GCCACCTCGA CACCGAAGCG
GTCGGCCAGA TGATCCCGCG CATCCGCGAG CACGTGAGCA TCCCGGTGGG CGTGGGCTTC
GGCATCCGCG ACGCGCGCAC GGCCCAGGCC GTCGGTTCGG CCGCCGATGC GGTCGTGATC
GGCACCAGGA TCATCCAGCT GATCGACGGG CAGCCGCGCG AGAAGGTGGT GCCCGCGGTG
CGCGAATTCC TCGCCGGCAT CCGCGAGGCG CTCGATGCCT TGCCGGCGGC TACCCCCAAG
AACGCGGCTG GCCGATAA
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| Protein sequence | MGARAGRIAA TFDALKKDGR RALIPYVTAG FPFADITPEL MHGMVEAGAD VIELGVPFSD
PMADGPVIQK AGEAALALGV GMKQVLAMVA AFRQKDAATP VVLMGYANPV ERYDLVHGKK
AFIRDASAAG VDGLLVVDYP PEECEAFAAD LKAAGIDLIF LLAPTSTSER MAQVARTASG
YVYYVSLKGV TGAGHLDTEA VGQMIPRIRE HVSIPVGVGF GIRDARTAQA VGSAADAVVI
GTRIIQLIDG QPREKVVPAV REFLAGIREA LDALPAATPK NAAGR
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