| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1383 |
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| Symbol | |
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| ID | 7971211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1507748 |
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| End bp | 1508902 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644791981 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002943300 |
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| Protein GI | 239814390 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGGTGA CCGCCGGCAC GCGCTGGGCC TCGCGTGCGC AGTTCTTTTC GTCCGGTTTC
ATCTTTGCGA CCTGGGGCGT CCATGTTCCA ACGGTCAAGG CGCACTACGG CATCGACGAA
GCGCAGCTCG GGCTGGCGCT GCTCGCGGCC GGCGCCGGCG CGATGTTCGG GTTGACCAGC
GCCGGCCGCT GGATCGGCCG CCACGGCCCG CGGCGCATGG CTGCGCTCTG CGGCTCTATC
TACGCGCTGC TGCTCGCCGG CCTGATCGCG ATGCCGGGCT ATCCTTTTCT TTTGGCGTTG
CTGGCGGCCT TCGGCCTTGT GACCAGCGTG TTCGACGTGG CCATCAACAC CGAGGCGGCG
CAGCTCGAGC TGCGCGGCGG CACGCCCCTG ATGAGCGGCA TGCACGGCAT GTTCAGCCTG
GGCGGCATGG CCGGCGCCGC GAGCGGCAGC GCGGCGCTGG CCGCCGGGCT CGGCGCACAG
GCGCATCTGC TCTGGGTGGC GGCGGCGATG GTGCTGGTGG TTGCCTGCTC CTCGATGCAC
ATGCTGCCCA AGCCGCCCGT TGCGAGCGAT GCGGCCCCGG CAGACCATCG CTTCCGGTTG
CCCCGCGGCA CGCTGGCGGT GCTTGGCGTG CTCGCCGCGC TGGGCCTGAT TGCCGAGGGC
GCCATCTACG ACTGGAGCGT GCTCTACATG CAGCAGGAAC TCGGCAGCCC GCAAAAGCAG
GCCGCGCTGG CCTACGCGAG CTTCTCCGCC GCCATGGCGG CCGCGCGCTT CGGCGGCGAC
GCCCTGCGCG CGCGCTTTTC ACCGACGGCG CTGCTGCGCG GCAGCGGCAT TCTTGCGGCG
GCGGCCATGG CGCTGGTGCT GCTGACCGAC CTGCCCTGGC TCGCGCTGCT CGGCTTCGCG
GGCGTCGGCA TCGGCTTTGC GAACGTGGTG CCGATCCTGT TCGGCGCCTC GGCGCGCGTG
CCCGGCGTCG AGCCCGCCAT CGGCATTGCC GCCGTCTCGG CCGTGGCCTA CCTGGGTTTC
ATGGCCGGCC CGGCGGTGAT CGGGCTGCTC GCGCGGGCCA GCTCGCTGAC GGCCGCGCTC
TATGTGGTCG TGGTGTTTGC TGCGGCGCTG GCGGCGTCGG CCCGCTTCAC GGGAGACGAG
AGCCGCCGCG CCTGA
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| Protein sequence | MGVTAGTRWA SRAQFFSSGF IFATWGVHVP TVKAHYGIDE AQLGLALLAA GAGAMFGLTS
AGRWIGRHGP RRMAALCGSI YALLLAGLIA MPGYPFLLAL LAAFGLVTSV FDVAINTEAA
QLELRGGTPL MSGMHGMFSL GGMAGAASGS AALAAGLGAQ AHLLWVAAAM VLVVACSSMH
MLPKPPVASD AAPADHRFRL PRGTLAVLGV LAALGLIAEG AIYDWSVLYM QQELGSPQKQ
AALAYASFSA AMAAARFGGD ALRARFSPTA LLRGSGILAA AAMALVLLTD LPWLALLGFA
GVGIGFANVV PILFGASARV PGVEPAIGIA AVSAVAYLGF MAGPAVIGLL ARASSLTAAL
YVVVVFAAAL AASARFTGDE SRRA
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