Gene Vapar_1333 details

Gene Information

• Locus tag: Vapar_1333
• ID: 7973014
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: -
• Start bp: 1450786
• End bp: 1451376
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 644791931
• Product: transcriptional regulator, TetR family
• Protein accession: YP_002943250
• Protein GI: 239814340

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACATCT CCGCACTGCC CGCGCGCGAG CGCATCCTGC TCACAGCGCA CGACCTCTTC 
TATGCCGATG GCATCCGCGC CACCGGCATC GACCGCGTCA TTGCCGCCTC GGGCGTCACC 
AAGGTCACCT TCTACCGGCA CTTCCCGTCG AAGGACGACC TGGTGCGCGA ATTTCTCGAT 
CACCGGCATG CACGATGGAT GGCCTGGTTC GTCGATGCAC TGGGGCGCCG CGGCGCGCAC 
GAACGCGCCG GCAATGCCGG GGCCCTGCTG CTGCTCGCCG ACGCGATGGC CGAATGGTTC 
GCCGACCCGG CCTTTCGCGG CTGCGCCTTC ATCAACGCGG TGGCCGAGGT GGGCGGCAGC 
GTGGAGGGCG CCGCCGAGCG CGCGCGCGAG CACAAGCGCG AGATGGTGGA GGTCATTGCC 
GGCCTGCTGC CCGCGGCCTT GCCCGCGCGC ATGGCGCTCG CCCAGGCCGC GGCGCTGGGC 
GTGGACGGTG CCATCGTCAA GGCGCAGATG GGCGGCGCCG CGCTGGCGCG CGAAGCCGTC 
GACGACCTGC GGCGCCTGCT CGAGCCACTG GCCGCCACGC TGCATCGATA A 

 

Protein sequence

MDISALPARE RILLTAHDLF YADGIRATGI DRVIAASGVT KVTFYRHFPS KDDLVREFLD 
HRHARWMAWF VDALGRRGAH ERAGNAGALL LLADAMAEWF ADPAFRGCAF INAVAEVGGS 
VEGAAERARE HKREMVEVIA GLLPAALPAR MALAQAAALG VDGAIVKAQM GGAALAREAV 
DDLRRLLEPL AATLHR