Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1314 |
Symbol | |
ID | 7972995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1430582 |
End bp | 1432909 |
Gene Length | 2328 bp |
Protein Length | 775 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644791912 |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_002943231 |
Protein GI | 239814321 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.788879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACAG AATCACTTTC CGCCGTGCGC GATGCTGCGC TCGACTACTT CGTTCGCAGC CGTTCCATCC AGCGGCGGCG CGAGCGCATG GAGCGGCCCG ATGCCGACGA GGCGCAGGGC TGGAGCGCCA TGGCCGAGCT GGGCTGGACC GGCATGCTGG CACCCGAGTC CGCGGGCGGG CTGGGGCTGA ATCTTGCGGG CGCCGCGCAG ATCCTGCGGG CCGCGGGCGA GCATGTGGCG CCCGAGCCGT TGCTGGCGGT GGCGGGCCTG AGCGCGATGC TGCTCGCGCG GCTCAAGGCT CCGGCCGCGC AGTCGCTGCT GGCCGAACTG GTCGCGGGCC GCAGCCTGCC GGCGCTGGCC TGGCAGGAGA GCGCAGGCGA CCTGAGCGCC GTGCCGCTCG CCTGCGGTTG CGAGCCGCGC GCGGGGCATG CGGGCGGCGT GCTGCTGCAG GGCGAGAAGC TCATGGTGCT GCCCGGCGCG GCCGCCAGCG GCTGGCTGGT GTCGGCGCGC GGCAGCGACG ACGCGGTGCT GCTGTGGGTG CCGCGCGGCA CGGCCGGCGT GAGCGAAACC CTGGTGCCGC TGGTTGACGG CAGCCAGGCT GCGAGCCTGC GCTTCGAGCA GGTGGCGCTG CCCGCGGACG CGGTGCTGGC CGAAGGCCCC GCCGCGCAGG ACGCGCTGCG CCACGCGCTC GCGGCCGGCC AGGTCCTGCA GGCGGCCGAA CTGCTGGGCG TGGGCCAGGC GATGCTCGCG CAGACGCTGG CCTACCTGCG CACCCGTTCG CAGTTCGGCA AGCCCATCGG CAGCTTCCAG GCGCTGCAGC ACCGCTGCGT GGACATGTTC ATCCACCTCG AAGTGGCGCA GGCCGCGCTC GCCGAGGTGC TGGCACTGGC GGACCAGGGG CTCCCGGCCG AACGGCTCGA AGCCGAAGCC AGCCGCGTCA ACGCCCGCTG CACCGCCGCG GCGCTGCAGG CCTCGCGCAC GGCAGTGCAG CTGCATGGCG CCATCGGCTA CACGCAGGAG TGCGAGCTGA GCCTCTACTA CAAGCGCACG CTGTGCCTTT CGGCGTGGCT CGGCAACGTG GCCGCGCACC AGCGCCGGCA TGCCGCGCTG GCCGACGGCG GCGAAGCGCG GGCGGGCACC GCCGCATGGG AGGGCGAGTT TCCGCGCAGC GCCGACTGGC ATGCGATGCC CGAGGCCGAG TTCCGGCGCA TGGTGCGCGC CTTCCTGCAG CAGCGCTATC CGCAGCAGCT GCGCTACCTG TCGCACCGCG CGCGCTGGAG CGAGATCCGC GAGTGGTATC TCACGCTGTC GGCGCAGGGC TGGATCGCGC CGGCGTGGCC CCAGGTGCAT GGCGGCATGG GACTGCCGGC CGACAAGCTC ATTGCATGGA TCGAGGAGCT CGAGCAGCAC GGCGTGGCGC GCGCGCCGGA CCAGGGCATC GTGATGATCG GCCCGCTGCT GATCCAGCAT GGCACGCCGG AGCAGCAGCA GCGCTTCCTG CCGCGCATCC TGAGTGGCGA GCATGTGTGG TGCCAGGGCT ATTCGGAGCC CAATGCCGGC TCCGACCTGG CGGGCCTTCG CACCGAGGCG GTGGCGGGAC GCGATGCCGA GGGCGATCAC TTCATCGTCA ACGGCCAGAA GATCTGGACC ACGCTCGCGC AGGATGCCAA CCACATCTTC ATGCTCGTGC GCACCGACAA GGCCGCGCGC AAGCAGGAGG GCATCAGCTT CCTGCTGTGC GACCTGCGCA CGCCGGGCAT CACGGTGCGG CCCATCCACA CGCTCTCGGG CGAGCCCGAG TTCTGCGAAG TGTTCTTCGA CAACGTGCGC GTGCCGGCCG AAAACCTCGT GGGCCGGCTG CATGGCGGCT GGACGATTGC CAAGGCGCTG CTGGGCTTCG AGCGCATCTT CCTCGGCAGC CCCAAGCAGT CGCAGTACGC GCTGGGCCAG CTCGCGCGGT TGGCGCAGGC GCGGCGCCTG TTTGCAGACC CGGTGTTCGC GCAGCGCTTT GCCGCACTGC GGCTCGACGT GCTCGATCTG TCGGCCGCGT ACACGGGCTT TGCCGACATC GTGCGCGCGG GCCAGCCGCT GCCGGCATCG GTGTCGTTGC TCAAGATATG GGCCAGCGAA ACCTACCACC GCATCGGCGC GCTGCTGGTC GAGGCCGGCG AAGAGCAGGG CGCCGTCGCG GGCGACCAGC TGCTCGACGG GCAGAGCTTC AACGTGCTGT CGCCGCTCAT CGGCTCCACC GCCGCAATGA TCTATGGCGG CACCAACGAG ATCCAGCGCA ACATCCTCGC GCGGCAGGTG CTCGACCTGC CGGCCTGA
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Protein sequence | MDTESLSAVR DAALDYFVRS RSIQRRRERM ERPDADEAQG WSAMAELGWT GMLAPESAGG LGLNLAGAAQ ILRAAGEHVA PEPLLAVAGL SAMLLARLKA PAAQSLLAEL VAGRSLPALA WQESAGDLSA VPLACGCEPR AGHAGGVLLQ GEKLMVLPGA AASGWLVSAR GSDDAVLLWV PRGTAGVSET LVPLVDGSQA ASLRFEQVAL PADAVLAEGP AAQDALRHAL AAGQVLQAAE LLGVGQAMLA QTLAYLRTRS QFGKPIGSFQ ALQHRCVDMF IHLEVAQAAL AEVLALADQG LPAERLEAEA SRVNARCTAA ALQASRTAVQ LHGAIGYTQE CELSLYYKRT LCLSAWLGNV AAHQRRHAAL ADGGEARAGT AAWEGEFPRS ADWHAMPEAE FRRMVRAFLQ QRYPQQLRYL SHRARWSEIR EWYLTLSAQG WIAPAWPQVH GGMGLPADKL IAWIEELEQH GVARAPDQGI VMIGPLLIQH GTPEQQQRFL PRILSGEHVW CQGYSEPNAG SDLAGLRTEA VAGRDAEGDH FIVNGQKIWT TLAQDANHIF MLVRTDKAAR KQEGISFLLC DLRTPGITVR PIHTLSGEPE FCEVFFDNVR VPAENLVGRL HGGWTIAKAL LGFERIFLGS PKQSQYALGQ LARLAQARRL FADPVFAQRF AALRLDVLDL SAAYTGFADI VRAGQPLPAS VSLLKIWASE TYHRIGALLV EAGEEQGAVA GDQLLDGQSF NVLSPLIGST AAMIYGGTNE IQRNILARQV LDLPA
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