| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1310 |
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| Symbol | |
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| ID | 7972991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1426431 |
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| End bp | 1427138 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791908 |
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| Product | Arylmalonate decarboxylase |
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| Protein accession | YP_002943227 |
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| Protein GI | 239814317 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3473] Maleate cis-trans isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.65094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGGC CGCACCTGGG CCTGATCGTG CCGCCGGCCG CCGGCGCGGT GCCGGTGGAC
GGCCCGCTGC TCTACGGCGA GCGCATCCGC TTTTCAGCAA GAGGCTTGGG ACTCGGCGAA
ATCTCGACCC GCGGCTACAC CGAAGTGATC GACTCGGTCG TCGACAAAGC GCTGGAACTC
AAGGCGGAGG GCGCCAGCGC CGTCTCCCTC ATGGGCACCT CGCTGAGCTT CTTCCGCGGC
GTCGCCTTCA CGCGTCAACT CAAGCGCGAG ATGGAACAGG CGACGGACCT GCCTTGCACG
ACGATGAGCG ACGCCATCAT CGCGGGCCTG CATCACCTGA AGGTTCGGCG CGTGGCCGTC
GCCACCGCCT ACATCGACGA GGTCAACACG CAGCTGCGAA CCTACCTTGA ACAGAGCGAC
TTCGAACCGC TGGCGCTCGA AGGCCTCGCC ATCTCCGATG TGCAGGCCGT GGGCCAGGTG
CCGACCGAGG TGCTGGTCGA CCTGTGCCTC AAGGTGTTCG AGGACCAGCC CGGCGCCGAT
GGCCTCCTCA TCTCGTGCGG GGGCCTCGTC ACGCTCGATG CCGTGCGCGA GGTCGAGGCG
CGCCTGCAGG TGCCCGTGGT GTCCAGTTCG CCCGCGGGCT TCTGGGACCT CGTGCGCACC
GCGGGGCTCG ATGCGCGCTC GCCGGGGCAG GGCCGGTTGT TCGCCTGA
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| Protein sequence | MARPHLGLIV PPAAGAVPVD GPLLYGERIR FSARGLGLGE ISTRGYTEVI DSVVDKALEL
KAEGASAVSL MGTSLSFFRG VAFTRQLKRE MEQATDLPCT TMSDAIIAGL HHLKVRRVAV
ATAYIDEVNT QLRTYLEQSD FEPLALEGLA ISDVQAVGQV PTEVLVDLCL KVFEDQPGAD
GLLISCGGLV TLDAVREVEA RLQVPVVSSS PAGFWDLVRT AGLDARSPGQ GRLFA
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