Gene Vapar_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1298 
Symbol 
ID7973223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1413387 
End bp1413614 
Gene Length228 bp 
Protein Length75 aa 
Translation table11 
GC content64% 
IMG OID644791896 
ProductSirA family protein 
Protein accessionYP_002943215 
Protein GI239814305 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0425] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGTTG ACCGCGAACT CGACACGCGG GGCCTGAACT GCCCGCTGCC CATTCTCAAG 
GCAAAGAAGT CGCTCAACGA CATGGCGAGC GGCCAGCTGC TGAAGGTGGT GTCGACCGAC
CCGGGATCGC TGCGCGACTT CCAGGCCTTT GCGCGGCAGA CCGGCAACGA GCTGGTCGAG
CAGCAGACGA TCGGCAGCGA CTTCATCCAT GTGCTGAAGA GGCGCTGA
 
Protein sequence
MQVDRELDTR GLNCPLPILK AKKSLNDMAS GQLLKVVSTD PGSLRDFQAF ARQTGNELVE 
QQTIGSDFIH VLKRR