| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1273 |
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| Symbol | |
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| ID | 7973197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1388655 |
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| End bp | 1389770 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791870 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_002943190 |
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| Protein GI | 239814280 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.592297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTCA ATTTCACCGA CGACCAGGAA CAGCTGCGCG ACGCCGTTCG CAAGTGGGTC
GACAAGGGCT ATGACTTCGA ACGCCGCCGC GGCATCGAGG CCCACGGCGG CTTCTCGCGC
GAGGCCTGGG ACGAACTGGC CGAGCTCGGC CTGGGCGGCC TCTACATCGC CGAGGACGAC
GGCGGCCTGG GCATGGGCCC GGTGGCCGGC ATGGTGGTGA TGGAAGAGCT GGGCCGCGGC
ATCGTGCTGG AGCCCTTTGC GCAGACACTG ATCGCCGGCG CCGTGCTGAG CGGCTACGCC
GGTGCCGACA CCAAGGACAA CTGGCTGCCG CGCATCGCCG GCGGCCAGGC CATCGTGGTG
CTGGCTCATC AGGAACGCAA GTCGCGCTAT CGCCTGGACG TGTGCGAGGC CCATGCGGCC
AAGGCCGGCG ACGGCTGGTC GCTGACCGGC GCCAAGAGCG TGGTGCCCGT GGGCGACGAG
GCCGACGCCT ACCTGGTGCC GGCCAAGGCC GACGGCAGGA TCGCCCTCTT CCTGGTCGAA
CGCAGTGCGA GCGGCGTCGA GGCCCGCGGC TACGGAACGC AGGACGGCGG CCGCGCGGCC
GAGGTGGTGT TCGACAAGGC AGACGCCACG CTGGTCACGG CCGACGGCCT GGCCGCGCTC
GAATATGCGG TGGACGTCGG CATTGCCGCC ACCTGCGCCG AAGCGGTCGG CGTGATGGAC
AAGACCCTGG CCCTCACCGT CGACTACATG AACCAGCGCA AGCAGTTCGG CGTGACCATC
TCCACCTTCC AGGCGCTGCG CCACCGCGTG GCCGACATGA AGATGCAGCT CGAGCTCGCG
CGCTCGATGA GCTACTACGC CACGCTCAAG CTCAATGCGC CCGCCGAGGA GCGGCGCCAG
GCGCTGGCGC GCGCCAAGTA CCAGCTGGGC GTGTCGATGC GTTTTGTCGC CGCGAATTCG
GTGCAGCTGC ATGGCGGCAT CGGCGTGACC GACGAATACA TCGGCAGCCA CTATTTCCGC
AAGCTCACGC AGCTCGAAAT GACCTTCGGC GACACGCTGC ACCACCTGGG CGAAGTGTCG
GCGCGCATGC AGGACACGGC CGGCGTCTTC GCCTGA
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| Protein sequence | MDFNFTDDQE QLRDAVRKWV DKGYDFERRR GIEAHGGFSR EAWDELAELG LGGLYIAEDD
GGLGMGPVAG MVVMEELGRG IVLEPFAQTL IAGAVLSGYA GADTKDNWLP RIAGGQAIVV
LAHQERKSRY RLDVCEAHAA KAGDGWSLTG AKSVVPVGDE ADAYLVPAKA DGRIALFLVE
RSASGVEARG YGTQDGGRAA EVVFDKADAT LVTADGLAAL EYAVDVGIAA TCAEAVGVMD
KTLALTVDYM NQRKQFGVTI STFQALRHRV ADMKMQLELA RSMSYYATLK LNAPAEERRQ
ALARAKYQLG VSMRFVAANS VQLHGGIGVT DEYIGSHYFR KLTQLEMTFG DTLHHLGEVS
ARMQDTAGVF A
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