| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1267 |
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| Symbol | |
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| ID | 7973191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1381155 |
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| End bp | 1381667 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644791864 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_002943184 |
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| Protein GI | 239814274 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.131578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGGCGG CACGCACCAT GTCGGCATCG CGCTCGCGCA GCGGCAGCAT CTGGCCATGG
CTCGGGCTGG CGGCGATCAT CCTGATCATC GACCAATTCA CCAAGACGCT GATCCTGGGC
TACTACAAGC TGGGCGACGC AACCTACGTC ACGGGCTTCT TCAACGTGGT TCGCGCGCAC
AACACGGGCG CCGCGTTCTC GTTCCTGGCC GACCACTCGG GCTGGCAGCG CTGGTTCTTC
ACGGCCATTG GCGTGGCGGC CGCGGTGTTC ATCGTGTGGA TGCTGAAGTC GCACGCGGGG
CAGAAGCTCT TTTCGTTCTC GATGGCCTGC ATCCTGGGCG GGGCGATCGG CAATGTGATC
GACCGGATGA TGCACGGCTA CGTGGTGGAC TTCCTGAGCT TCCACGTGGG CAATTGGTAC
TTCCCGGCGT TCAATGCGGC GGACAGCGCG ATCACGCTGG GGGCGATCTG CCTGGTGCTG
GATGAGATAC GGCGGGTTCG GCGGGGGAAG TAG
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| Protein sequence | MAAARTMSAS RSRSGSIWPW LGLAAIILII DQFTKTLILG YYKLGDATYV TGFFNVVRAH
NTGAAFSFLA DHSGWQRWFF TAIGVAAAVF IVWMLKSHAG QKLFSFSMAC ILGGAIGNVI
DRMMHGYVVD FLSFHVGNWY FPAFNAADSA ITLGAICLVL DEIRRVRRGK
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