| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1236 |
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| Symbol | |
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| ID | 7973160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1349835 |
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| End bp | 1351145 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791833 |
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| Product | phenylacetate-CoA ligase |
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| Protein accession | YP_002943153 |
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| Protein GI | 239814243 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1541] Coenzyme F390 synthetase |
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| TIGRFAM ID | [TIGR02155] phenylacetate-CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCCA GACACCCTGC CCCCGGCGAG CTCGAGCCCA TCGAAACCGC GAGCCGCGAC
GAGATCACCG CGCTGCAGAT CCAGCGCCTG CGCGCCACGC TGCAGCGCGC CTACGACCAC
GTGCCGCACT ACCGCCGGGC CTTCGATGCC AAGGGCGTGC ACCCTCATGA CCTGAAGTCG
CTCGCCGACC TCTCGAAGTT TCCGTTCACG GTGAAGACCG ACCTGCGCGA CAACTACCCC
TTCGGCATGT TCGCCGTGCC GCGCGCGCAG GTGGCGCGCA TCCATGCCTC GTCGGGCACC
ACCGGCAAGC CGACCGTGGT CGGCTACACG CTGAAGGACA TCGACACCTG GGCCGACCTG
GTCGCGCGCT CCATCCGCGC CGCGGGTGGC CGTGCCGGCG ACATGGTGCA CGTGTCGTAC
GGCTACGGCC TCTTCACCGG CGGCCTTGGC GCGCACTACG GCGCCGAGCG CGCGGGCTGC
ACCGTCATCC CGATGTCGGG CGGCCAGACC GAGAAGCAGG TGCAACTCAT TCAGGACTTC
AAGCCCGACA TCATCATGGT CACGCCCAGC TACATGCAGG TGATCATCGA GCAGTTCGAG
CGCCAGGGCC TCGATGCCAA GGACAGCTCG CTCCGGATCG GCATCTTCGG CGCCGAGCCG
TGGACCGAGG CCATGCGCCG CGACATCGAA GCCAAGGCCG GCCTCGATGC GGTCGACATC
TACGGCCTGT CCGAAGTGAT GGGCCCGGGC GTGGCCAGCG AATGCGTCGA GAGCAAGGAT
GGCCCCGTGA TCTGGGAAGA CCACTTCTAT CCCGAGATCA TCGACCCCGA CACCGGCGAG
CTCAAGGCCG ACGGCGAGGA AGGCGAGCTG GTCTTCACCT CGCTCAGCAA GGAGGCCATG
CCGATCGTGC GCTACCGCAC GCGCGACCTC ACGCGCCTGT TGCCGCCCAC CTCGCGTTCG
TTCCGCCGCA TGGGCAAGAT CGTCGGGCGC AGCGACGACA TGATGATCAT CCGCGGCGTC
AACGTCTTTC CCACGCAGGT CGAAGAGATC GTGCTCGCGC ACAGCGCGCT CACCGGCCTG
TACCAGGTGC GCGTGAGCCG CGAAGGCCTG CTCGACCAGG TCGAGGTGCA CTGCGAACTC
ACACCGCACG AGGCCGCCGC GGCCGACCGC AACGCCATCT CCGACTGGGT GCAGCACCGC
GTGAAGACGC TCATCGGCAT CTCCACCCGC GTGGTCGTGC ACGGCCCCGA CGAAATGGAA
CGCACGCAGA CCGGCAAGGC CCGCCGCGTG ATCGACACGC GCCCGCGCTG A
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| Protein sequence | MTARHPAPGE LEPIETASRD EITALQIQRL RATLQRAYDH VPHYRRAFDA KGVHPHDLKS
LADLSKFPFT VKTDLRDNYP FGMFAVPRAQ VARIHASSGT TGKPTVVGYT LKDIDTWADL
VARSIRAAGG RAGDMVHVSY GYGLFTGGLG AHYGAERAGC TVIPMSGGQT EKQVQLIQDF
KPDIIMVTPS YMQVIIEQFE RQGLDAKDSS LRIGIFGAEP WTEAMRRDIE AKAGLDAVDI
YGLSEVMGPG VASECVESKD GPVIWEDHFY PEIIDPDTGE LKADGEEGEL VFTSLSKEAM
PIVRYRTRDL TRLLPPTSRS FRRMGKIVGR SDDMMIIRGV NVFPTQVEEI VLAHSALTGL
YQVRVSREGL LDQVEVHCEL TPHEAAAADR NAISDWVQHR VKTLIGISTR VVVHGPDEME
RTQTGKARRV IDTRPR
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