| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1235 |
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| Symbol | paaA |
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| ID | 7973159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1348780 |
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| End bp | 1349793 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644791832 |
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| Product | phenylacetate-CoA oxygenase subunit PaaA |
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| Protein accession | YP_002943152 |
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| Protein GI | 239814242 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3396] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02156] phenylacetate-CoA oxygenase, PaaG subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACACCC AGGCAATGGA CACCATGGGC AAGGACGCAG GCGACGGCAA GCAGAAGAAA
GCCGTGCGCT CCGCCGAGGA AATGCGGCTC GAGGAGCGCT TCGACGCGCA CATCGATGCC
GGCGACTTCA TCGAGGCGAA GGACTGGATG CCCGAGCACT ACCGCAAGAC GCTGGTGCGC
CAGATCAGCC AGCATGCGCA TTCGGAGATC GTCGGCATGC TGCCCGAAGG CAACTGGATC
GGCCGCGCGC CCACGCTCAA GCGCAAGGCC ATCCTGCTGG CCAAGGTGCA GGACGAAGGC
GGCCACGGGC TGTACCTGTA CGCGGCCGCC GAAACGCTGG GCACCTCGCG CGACCAGATG
TTCGACGCGC TGCACAGCGG TAAGGCCAAG TACAGCTCGA TCTTCAACTA CCCCACGCTC
ACCTGGGCCG ACATGGGCAC CATCGGCTGG CTGGTCGATG GCGCGGCCAT CATGAACCAG
GTGCCGATCT GCCGCTGCTC CTACGCACCG TATGCGCGCG CCATGATCCG CATCTGCCGC
GAGGAGAGCT TCCACCAGCG CCAGGGCTAC GAAGCCCTGC TGACGATGAT GACGCACGGC
ACCGCGGCGC AGAAGGCGAT GGTGCAGGAC GCGGTCAACC GCTGGTGGTG GCCCTCGGTC
ATGATGTTCG GCCCGCCGGA CGACCAGTCG CCCAACAGCG CGCAGTCGAT GCGCTGGGGC
ATCAAGCGCT TCAGCAATGA CGAGCTGCGC CAGAAGTTCA TCGACGCCGC CGTCGAGCAG
GCGCGCATCC TCGGCGTGAC CCTGCCCGAC CCCGACCTCA AGTGGAACGA AGAGCGCCAG
GCGCACGACT TCGGCGCCAT CGACTGGAGC GAGTTCTGGC GCGTGATCGG CGGCGACGGT
CCCTGCAACC GCGAACGCCT GCAGGCCCGC GTCGATGCCT GGGAAGAAGG CGCGTGGGTG
CGCGAAGCCG CGATGGCCTA CGCCAACAAG CAACCGATGA AGGAGGCCGC ATGA
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| Protein sequence | MYTQAMDTMG KDAGDGKQKK AVRSAEEMRL EERFDAHIDA GDFIEAKDWM PEHYRKTLVR
QISQHAHSEI VGMLPEGNWI GRAPTLKRKA ILLAKVQDEG GHGLYLYAAA ETLGTSRDQM
FDALHSGKAK YSSIFNYPTL TWADMGTIGW LVDGAAIMNQ VPICRCSYAP YARAMIRICR
EESFHQRQGY EALLTMMTHG TAAQKAMVQD AVNRWWWPSV MMFGPPDDQS PNSAQSMRWG
IKRFSNDELR QKFIDAAVEQ ARILGVTLPD PDLKWNEERQ AHDFGAIDWS EFWRVIGGDG
PCNRERLQAR VDAWEEGAWV REAAMAYANK QPMKEAA
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