| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1218 |
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| Symbol | |
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| ID | 7973388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1331056 |
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| End bp | 1332033 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791815 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_002943135 |
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| Protein GI | 239814225 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCG CCGCTCCCCT CATCGAAGTC CGCGGACTCA AGAAATACTT CGGCGCCAGC
GACCGCCCGG TGCGCGCGGT CGACGACGTG TCTTTCGCGA TCCAGCCCGG CGAAACGCTG
GGCCTGGTCG GCGAATCGGG CTCGGGCAAG AGCACCATCG GCCGCACCGT GCTGCGCCTG
GTCGAGCGCA CCGAGGGCCA GGTGCTCTAC CGCGGCGACG ACATCGGCGC GCTGTCGGGC
GAACGCATGC GCCGGCTGCG CAGCAAGCTG CAGATCATCT TCCAGGACCC CTATGCGAGC
CTGAATCCGA AGATGCGCAT CAGCGCGATC CTCGGCGAGG CGCTGTCCAC GCACGGCCTG
CACAAGGGCG CGGCGGCGCG CGACAAGCGC ATTGCCGAGC TGCTCGAAAC CGTGGGCCTG
CGCGCCGAGC ATGCCAGCCG CTTCCCGCAC GAGTTCTCGG GCGGGCAGCG CCAGCGCATC
GGCGTGGCGC GCGCGCTGGC CGTGGAGCCC GAGTTCATCG TGGCCGACGA GCCGCTGTCG
GCGCTCGACG TGTCGATCCA GTCGCAGGTC ATCAACCTGC TGGCCGACCT GCGCGAGCGG
CTCGGCCTCA CCATGCTCTT CATCTCGCAC GACCTCGACG TGGTCGAGTA CCTGTGCGAC
CGCGTGGTGG TGCTGTACCT CGGCAAGGTG ATGGAAGTGG CGACCACCGA CGAGCTGTTC
GCGCGGCCTT CGCATCCCTA CACGCAGGCG CTGCTGGCCG CGAGCCCGAA GCCCGACCCG
ACGCTTGCCA CCGAGCGCAT CGCGCTCAAG GGCGATATCC CGAGCCCGAT CTCGCCGCCC
TCGGGCTGCG TGTTCCGCAC CCGCTGCCCG CACGCCATCG AGGCCTGTGC GCAGACGGTG
CCGCCGCTCG ACGAGATTTC CGCCGGACAC TACAGCGCCT GCATCCGAAA AGAGCTGCTC
TCCAACATTG CCGCATGA
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| Protein sequence | MTTAAPLIEV RGLKKYFGAS DRPVRAVDDV SFAIQPGETL GLVGESGSGK STIGRTVLRL
VERTEGQVLY RGDDIGALSG ERMRRLRSKL QIIFQDPYAS LNPKMRISAI LGEALSTHGL
HKGAAARDKR IAELLETVGL RAEHASRFPH EFSGGQRQRI GVARALAVEP EFIVADEPLS
ALDVSIQSQV INLLADLRER LGLTMLFISH DLDVVEYLCD RVVVLYLGKV MEVATTDELF
ARPSHPYTQA LLAASPKPDP TLATERIALK GDIPSPISPP SGCVFRTRCP HAIEACAQTV
PPLDEISAGH YSACIRKELL SNIAA
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