Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1202 |
Symbol | |
ID | 7973371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1315681 |
End bp | 1316454 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644791798 |
Product | cytochrome c1 |
Protein accession | YP_002943119 |
Protein GI | 239814209 |
COG category | [C] Energy production and conversion |
COG ID | [COG2857] Cytochrome c1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAA GCATTTCTGG CTGGCTCGCG GTTGTGGGCC TGGCCTTGGG CCTGACCTTT TCCGCAGCCG CATCGGCCGA GTCCGGCGGC ATGGCCTGGG ACAAGGCGCC CAACAAGACC ACCGACGTCG CCTCGCTGCA GAACGGCGCC AAGCTGTTCG TCAACTACTG CCTGAACTGC CACTCCGCGG CGTTCATGCG CTACAACCGG CTGCAGGACA TCGGCATCAC CGAGCAGCAG ATCAAGGACA ACCTCCTGTT CGCGACCGAC AAGGTCGGCG AGACCATGAA GGCCAACATC GACGCGCGCC AGGCCAAGGA ATGGTTCGGC ACGACGCCGC CCGACCTGAC CCTGGTGGCC CGCTCGCGCG CCGGCCATGG CGGCACGGGT GCGGACTACC TGTACACCTA CCTGCGTACC TACTACCGCG ACGACACCAA GGCCACCGGC TGGAACAACC TGCTGTTCCC GAGCGTTGCC ATGCCCAACC CGCTGTGGGA GCTGCAGGGC GAACGCCGTC CCGTCTACAC CAAGATCTCG CAGCATGGCC ACGAGACCGA AGTGTTCAAG GGCTGGGAGC AGGTGACCCC CGGCACCATG ACGCCGCTGC AGTTCGACAC TGCGGTCGGC GACCTGGTGA GCTACCTGCA ATGGATGGCC GAGCCGGCAC AGAACACGCG CATCCGCATC GGTGTGTGGG TGCTGCTGTT CCTCGTCATG TCGTTGGTCT TCGTGTGGCG ACTGAACGCC TCGTACTGGA AAGACGTCAA GTAG
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Protein sequence | MKKSISGWLA VVGLALGLTF SAAASAESGG MAWDKAPNKT TDVASLQNGA KLFVNYCLNC HSAAFMRYNR LQDIGITEQQ IKDNLLFATD KVGETMKANI DARQAKEWFG TTPPDLTLVA RSRAGHGGTG ADYLYTYLRT YYRDDTKATG WNNLLFPSVA MPNPLWELQG ERRPVYTKIS QHGHETEVFK GWEQVTPGTM TPLQFDTAVG DLVSYLQWMA EPAQNTRIRI GVWVLLFLVM SLVFVWRLNA SYWKDVK
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