Gene Vapar_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1168 
Symbol 
ID7973337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp1282464 
End bp1283072 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content66% 
IMG OID644791764 
ProductImidazoleglycerol-phosphate dehydratase 
Protein accessionYP_002943085 
Protein GI239814175 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0131] Imidazoleglycerol-phosphate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCC CCCAGACTGC CGATCGCACC GCATCGGTCA CCCGCAACAC CGCCGAGACG 
AAGATCACCG TCAGCGTCAA CCTGGACGGC ACGGGCAAGG CCAGGCTCTC CACCGGCATC 
GGCTTCTTCG ACCACATGCT CGACCAGATC GCCCGCCACG GCCTGATCGA CCTCGAGATC 
GACTGCCAGG GCGACCTGCA CATCGACGGC CACCACACGG TGGAAGACGT GGGCATCACG 
CTGGGCCAGG CGGTGGCCAA GGCCGTGGGC GACAAGAAGG GCATCCGCCG CTACGGCCAT 
GCCTACGTGC CGCTGGACGA GGCGCTGAGC CGCGTCGTCA TCGACTTCTC GGGCCGGCCC 
GGCCTGGTGA TGCACGTGCC GTTCACGAGC GGCATGATCG GCACCTTCGA CAGCCAGCTC 
ACCTACGAAT TCTTCCAGGG CTTCGTCAAC CACGCCTTCG TCACGCTGCA CATCGACAAC 
CTCAAGGGCG TCAATGCGCA CCACCAGTGC GAGACCGTGT TCAAGGCCTT TGCGCGCGCG 
ATGCGCGGCG CGCTCGAACT CGATCCACGC TCCGTGGGCG TCATTCCATC GACCAAGGGT 
TCGCTCTGA
 
Protein sequence
MTTPQTADRT ASVTRNTAET KITVSVNLDG TGKARLSTGI GFFDHMLDQI ARHGLIDLEI 
DCQGDLHIDG HHTVEDVGIT LGQAVAKAVG DKKGIRRYGH AYVPLDEALS RVVIDFSGRP 
GLVMHVPFTS GMIGTFDSQL TYEFFQGFVN HAFVTLHIDN LKGVNAHHQC ETVFKAFARA 
MRGALELDPR SVGVIPSTKG SL