Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1164 |
Symbol | hisG |
ID | 7973333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1279000 |
End bp | 1279641 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644791760 |
Product | ATP phosphoribosyltransferase catalytic subunit |
Protein accession | YP_002943081 |
Protein GI | 239814171 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0040] ATP phosphoribosyltransferase |
TIGRFAM ID | [TIGR00070] ATP phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.746546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCACCC TCGCGCTCTC GAAGGGCCGC ATCTTCGAAG AGACGATGCC GCTGCTGGCC GCCGCCGGCA TCGAGGTCAC CGAAGACCCC GAAAAATCGC GCAAGCTGAT CCTGGCTACC ACCCGGCCCG ACGTGCGCGT GGTGCTGGTG CGCGCCTCCG ATGTGCCCAC CTACGTGCAG TACGGCGGCG CCGACCTTGG CGTGACCGGC CTGGACGTGC TGCTGGAAAA CGGCAACCAG GGCATGTACC AGCCGCTGGA CCTGCGCATC GCGGCCTGCC GCCTCAGCGT GGCGGTGCGC GCCGACTACG ACTACGCCTC GGCCGTGAAG CAGGGCTCGC GCCTGAGGGT CGCCACCAAG TATGTGGGCC TTGCACGCGA GTTTTTCGCG AGCAAGGGCG TGCACGTCGA CCTGATCAAG CTCTACGGCA GCATGGAGCT CGCGCCGCTC ACCGGCCTGG CCGACGCCAT CGTCGACCTG GTCTCGACCG GCAACACGCT CAAGGCCAAT CACCTGGTCG AGGTCGAACG CATCATGGAC ATCAGCGCGC GCCTCGTGGT CAACCAGGCC GCGCTCAAGC TCAAGCGCGA GCCGATCCGC CGCATCATCG ACGCCTTTGC GTCGGCCATT CCCACTGCCT GA
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Protein sequence | MITLALSKGR IFEETMPLLA AAGIEVTEDP EKSRKLILAT TRPDVRVVLV RASDVPTYVQ YGGADLGVTG LDVLLENGNQ GMYQPLDLRI AACRLSVAVR ADYDYASAVK QGSRLRVATK YVGLAREFFA SKGVHVDLIK LYGSMELAPL TGLADAIVDL VSTGNTLKAN HLVEVERIMD ISARLVVNQA ALKLKREPIR RIIDAFASAI PTA
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