Gene Vapar_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1162 
Symbol 
ID7973331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1277434 
End bp1277676 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content61% 
IMG OID644791758 
ProductBolA family protein 
Protein accessionYP_002943079 
Protein GI239814169 
COG category[K] Transcription 
COG ID[COG5007] Predicted transcriptional regulator, BolA superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCG AACAACTCCA GGCCCTGATC CAGTCCCATC TTCCCTGCGA GCACATCACG 
CTCGAAGGCG ACGGCCGGCA TTGGTATGCC ACCATCGTCT CGGCCGAATT CGAGGGCAAG
CGCGCGATTC AGCGCCATCA GCGGGTCTAC GCGACCCTGG GTGCGAAAAT GCATACCGAC
GAGGTGCATG CGCTCTCGAT GAAGACCTAC ACGCCGGCCG AATGGGCGGC GTTGGAAAAA
TAA
 
Protein sequence
MTAEQLQALI QSHLPCEHIT LEGDGRHWYA TIVSAEFEGK RAIQRHQRVY ATLGAKMHTD 
EVHALSMKTY TPAEWAALEK