| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1155 |
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| Symbol | |
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| ID | 7973324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1272357 |
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| End bp | 1273139 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791751 |
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| Product | protein of unknown function DUF140 |
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| Protein accession | YP_002943072 |
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| Protein GI | 239814162 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
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| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTGGT GGAAGCCCGC CGACATCGGC TTTGCGGTTC GCAGCAAGCT GGCCGACCTG
GGCTATGGCG CCAAGCTGTT CCTGCGCCTG CTGGTGCAGG GGGCACAAAG CTTGCAGCGC
TTCGGCCTGG TGCGCGACCA GATCCATTTT CTCGGCAACT ACTCGCTGGC CATCATTGCG
GTGTCGGGGC TTTTCGTGGG CTTCGTGCTG GGCCTGCAGA TGTACTACGC GCTGCAGCGC
TACGGTTCTT CCGAGGCGCT CGGCCTCCTG GTGGCGCTGA GCCTGGTGCG CGAGCTCGGG
CCGGTGGTGG CGGCCCTGCT GTTCACGGGG CGCGCCGGTA CTTCGCTCAC CGCGGAGATC
GGCCTCATGA AGGCCGGCGA GCAGCTCAGC GCCATGGAGA TGATGGCGGT CGACCCGGTG
CAGCGCATTC TTGCGCCGCG CTTCTGGGCC GGCGTGATCA CGATGCCGCT GCTGGCGGCC
GTGTTCAGCG CGGTCGGCAT CATGGGCGGC TATGTGGTGG GCGTGCTGAT GCTGGGTGTG
GACCCGGGCG CGTTCTGGGG CCAGATGCAG GGCGGCGTCG ACGTCTGGCG CGACGTGGGC
AACGGCGTGA TCAAGAGCAT CGTGTTCGGC TTCACCGTGA CCTTCATCGC ACTGCTGCAG
GGCTACGAGG CCCAGCCCAC GCCCGAAGGC GTGTCGCGCG CGACCACGCG CACCGTGGTG
ATGGCGTCGC TTTCGGTGCT CGGGCTCGAC TTCCTGCTCA CCGCCATGAT GTTCAGTATT
TGA
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| Protein sequence | MSWWKPADIG FAVRSKLADL GYGAKLFLRL LVQGAQSLQR FGLVRDQIHF LGNYSLAIIA
VSGLFVGFVL GLQMYYALQR YGSSEALGLL VALSLVRELG PVVAALLFTG RAGTSLTAEI
GLMKAGEQLS AMEMMAVDPV QRILAPRFWA GVITMPLLAA VFSAVGIMGG YVVGVLMLGV
DPGAFWGQMQ GGVDVWRDVG NGVIKSIVFG FTVTFIALLQ GYEAQPTPEG VSRATTRTVV
MASLSVLGLD FLLTAMMFSI
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