Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1150 |
Symbol | |
ID | 7973319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1263140 |
End bp | 1264024 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644791746 |
Product | hypothetical protein |
Protein accession | YP_002943067 |
Protein GI | 239814157 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCGC CGGCAGCAAC CAAGGCCGTG AAGACGGCCA AGACCGCCAA GGCCGAAGCC GAGCTGGCGG AGGTCCTGCG GCCGGGCCAG TCGATCGAGC TTCTGAAGGA GCTGCACATC CTCACGCGCG AAGGCCGGCT CAACCAGGAT TCGCGGCGCA AACTCAAGCA GGTCTACCAC CTGTTCCAGT TCATCGAGCA GCTGCTGCGC GAACTGCCGG GCGGCGGCGC GGAAGCCACG CTGGCCGACC ATGGCGCGGG CAAGTCGTAC CTGGGCTTCA TCATCTACGA CCTGTTCTTC CGCTCGCGCG AAGGCGGCCA TGTCTACGGC ATCGAGACGC GCAGCGAGCT GGTCGAAAGA TCGCGCGCAT TGGCGCGCCA GCTCGGCTTC GACCGCATGT CCTTCCTGAA CCTCACCGTG GCCGAGTCGG CCCAGGCGAG CGAACTGCCC GAGCGCATCG ACGTGGTCAC CGCGCTGCAC GCCTGCGACA CCGCCACCGA CGACGCGATC GCCTTCGGGC TCGCAAAGAA GGCGCGCTGC ATGGTGCTGG TGCCCTGCTG CCAGGCCGAG GTGGCGGCCT GCCTGCGCGA AACCAAGGCG CTGGCCTTGT CGCGCACGCC ATTGGCCGAG CTCTGGCGCC ATCCGCTGCA CACCCGCGAA ATCGGCAGCC AGCTCACCAA CGTGCTGCGC TGCCTGTACC TCGAGGCCAA TGGCTACAGC GTCACGGTCA CCGAACTGGT GGGCTGGGAG CACAGCATGA AGAACGAGCT GATCCTGGCG CGCCACACCG GCCAGCGCAA GGCCGGTGCG GCGGCGCGGC TCGGCGAGCT GCTGTCGCAG TTCGGGCTCG ACACGCTGGG CGAGACGCGG TTTCGCCTGC CCTGA
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Protein sequence | MSAPAATKAV KTAKTAKAEA ELAEVLRPGQ SIELLKELHI LTREGRLNQD SRRKLKQVYH LFQFIEQLLR ELPGGGAEAT LADHGAGKSY LGFIIYDLFF RSREGGHVYG IETRSELVER SRALARQLGF DRMSFLNLTV AESAQASELP ERIDVVTALH ACDTATDDAI AFGLAKKARC MVLVPCCQAE VAACLRETKA LALSRTPLAE LWRHPLHTRE IGSQLTNVLR CLYLEANGYS VTVTELVGWE HSMKNELILA RHTGQRKAGA AARLGELLSQ FGLDTLGETR FRLP
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