| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1113 |
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| Symbol | |
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| ID | 7969635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1220436 |
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| End bp | 1221224 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791709 |
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| Product | sorbitol dehydrogenase |
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| Protein accession | YP_002943030 |
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| Protein GI | 239814120 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAC GTTTGAAGAA CCGCCACGTG CTGCTGACCG GCGCCGGTGG CGGCATCGGC
CTGGCCGTGG CCGAGGCCTG CATTGCCGAA GGCGCGCGCT GCAGCGTGAT CGACCGCGCC
GCGGCGGCGC CCGAAGCGGT GCGCGCGCTG CAGCAGCAGC ACCCCGACAA GCTCGCCTAC
ATCGCGGCCG ACGTGACCGA CACGCGGGCC ATCGCGCACA TGCTGGCCGA GGCGCAGGTC
GCCTTCGGTC CGATCCACAC GCTGTTCAAC AACGCCGCGG TGTTCGACCT GGCGCCGCTG
CTCGACAGCG ACGAGGCTTC GTTCGACCGG CTGTTCGCGG TCAACGTGAA GGGCATGTTC
TTCGTGATGC AGGCCGTGCT GCGCCACATG GTGGAGGCCG GCACGCAGGG GGCGTCGGTC
ATCAACATGG CCTCGCAGGC GGGGCGGCGC GGCGAGGCGC TGGTGTCGCA CTATTGCGCG
ACCAAGGCGG CGGTCATCAG CTACACCCAG AGCGCCGCGC TGGCCATGGC GCCGCACGGC
ATCCGTGTCA ACGGCATTGC ACCCGGTGTG GTCGACACGC CGATGTGGGA CCATGTCGAC
AGCCTGTTCG CCAAGGCCGA GGGGCTGCCG CCCGGCGAGA AGAAGCGCCG CGTGGGCCTG
GAGGTGCCGC TCGGCCGCAT GGGCGTGCCG GCCGACATCG CGGGCGCGGC CGTGTTTCTT
GCCAGCGACG AGGCGCGCTA CATCACGGCG CAGACTCTCA ATGTCGATGG CGGTAATGTC
ATGAGCTGA
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| Protein sequence | MSERLKNRHV LLTGAGGGIG LAVAEACIAE GARCSVIDRA AAAPEAVRAL QQQHPDKLAY
IAADVTDTRA IAHMLAEAQV AFGPIHTLFN NAAVFDLAPL LDSDEASFDR LFAVNVKGMF
FVMQAVLRHM VEAGTQGASV INMASQAGRR GEALVSHYCA TKAAVISYTQ SAALAMAPHG
IRVNGIAPGV VDTPMWDHVD SLFAKAEGLP PGEKKRRVGL EVPLGRMGVP ADIAGAAVFL
ASDEARYITA QTLNVDGGNV MS
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