Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1099 |
Symbol | |
ID | 7969621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1205821 |
End bp | 1206870 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644791695 |
Product | ABC transporter related |
Protein accession | YP_002943016 |
Protein GI | 239814106 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGGCA TCGAATTGCG CAACGTCACC AAGCGCTACG GCACCGACAA AAACGGGCCG CTGGCGGTCA AGGGCATCAG CTTCGAGGTG CCGGCGGGCA CGCTCACCAC CATCCTCGGG CCTTCGGGCT GCGGCAAGAC GACCACGCTG CGCATGATCG CGGGGCTCGA ATCGGCCAGC TCCGGCTCGA TCTTCATGGG CGGGCGCGAC GTGACCACGC TGGGCCCGGC CGAGCGCAAC GTGAGCATGA TGTTCCAGAG CTACGCGCTG TTCCCGCACA TGAACGTGAT CGAGAACGTG GGCTACGGCC TGCGCATGAG CGGCGTGAAG AAGGACGAGG CCGCCTTGCG CGCGCGCGGC GCGCTCAAGG GCGTGGGGCT GGTCGGCTTC GACGAGCGGC TGCCGAGCGA ACTCTCTGGC GGCCAGCAGC AGCGCGTGGC GCTGGCGCGC GCGCTGGTGC TGGAGCCCGC GGTGCTGCTG TTCGACGAGC CGCTGTCCAA CCTCGACGCC CGGCTGCGGC GCGAAATGCG CGAGGAGATC CGCGCGCTGC AGCAGCGCCT GAAGCTCACG GTGGCCTACG TCACGCACGA CCAGAGCGAG GCCCTGGCCG TGAGCGACCA GATCATCGTG ATGGACCACG GCGTGATCGC CCAGCGCGGC ACGCCCGAGC AGCTCTATGC CCGGCCCGAG AGCGAGTTCG TGGCCGGCTT CATGGGCGAG GCGATGGTGT TCCCGGCCAC GGCACAGGCC GACGGCAGCG TCGCGCTCGG CCCGCTGCGG CTGCAGCCGC GCCATGCGGT GGCGCCCGGC GCGGTGAAGG TGGCGGTGCG GCCCGAGGCC TGGGAGATCG GTGCCGCCGG CACGGCCGCG GGCCTGCCCG CCACGCTGCG CAAGGCGGCC TACCTCGGCA GCTTCTACGA ATACGGCTTC GACACGCCGC TGGGGCCGGT CTTCGTGGTG TCGACCGATC TGTCGAGTCC CCTGGCCGCG GGCGCCGAGG CCACGCTGTC GCTGGCGGCG CATGGCGTGA GCGTGGTGCC CGCCGCGTGA
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Protein sequence | MNGIELRNVT KRYGTDKNGP LAVKGISFEV PAGTLTTILG PSGCGKTTTL RMIAGLESAS SGSIFMGGRD VTTLGPAERN VSMMFQSYAL FPHMNVIENV GYGLRMSGVK KDEAALRARG ALKGVGLVGF DERLPSELSG GQQQRVALAR ALVLEPAVLL FDEPLSNLDA RLRREMREEI RALQQRLKLT VAYVTHDQSE ALAVSDQIIV MDHGVIAQRG TPEQLYARPE SEFVAGFMGE AMVFPATAQA DGSVALGPLR LQPRHAVAPG AVKVAVRPEA WEIGAAGTAA GLPATLRKAA YLGSFYEYGF DTPLGPVFVV STDLSSPLAA GAEATLSLAA HGVSVVPAA
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