Gene Vapar_1033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1033 
Symbol 
ID7972004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp1127833 
End bp1128420 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content69% 
IMG OID644791629 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002942950 
Protein GI239814040 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACTC AGCCGCCCAG CCTCAACGAC CGCATCGCGC AGCGCGTGCG GGACCTGCGC 
GCCGACCGCG GCCTTTCGCT CGAGGCGCTG GCGGCGCATT GCGGCGTCAG CCGCTCGATG 
ATCTCGCTCA TCGAACGCGG CGAAAGCAGC CCGACGGCGG TGCTGCTCGA GAAACTTGCA 
ACCGGCCTCG GCGTTCCGCT GGCGTCGCTG TTCGAGGCGC CGGTGCCTGC GTCGGGGCCG 
GTGTCCCGGC TGGCCGACCA GCTGCAATGG CGCGATCCGC ATTCGGGCTA TGTGCGCCGC 
AACGTGTCGC CCGGCGGCTC CGCATCGCCG ATCCACATCG TCGAGATCCT TTTTCCGCCC 
AAGGCGCGCG TGGCCTACGA AACCGGCGCG CGGGAACCGC AGGTCCACCA GCAGGTGTGG 
GTGCTCGAAG GAAGCATCGA AGTCACGCTC GGCGACGAGC GCCACCGGCT CGGCACGGGC 
GACTGCCTGG CGCTGGTGCT CGACCGTCCC ACCAGCTACT ACAACCCCAC GCGGCAGATC 
GCGCGCTATG CCGTCGTGAT CGCCACCTCG CCCTCTTCCT GGAGATGA
 
Protein sequence
METQPPSLND RIAQRVRDLR ADRGLSLEAL AAHCGVSRSM ISLIERGESS PTAVLLEKLA 
TGLGVPLASL FEAPVPASGP VSRLADQLQW RDPHSGYVRR NVSPGGSASP IHIVEILFPP 
KARVAYETGA REPQVHQQVW VLEGSIEVTL GDERHRLGTG DCLALVLDRP TSYYNPTRQI 
ARYAVVIATS PSSWR