| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1026 |
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| Symbol | |
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| ID | 7971997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1119721 |
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| End bp | 1120722 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791622 |
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| Product | hypothetical protein |
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| Protein accession | YP_002942943 |
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| Protein GI | 239814033 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.346833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAGC AACCATTCGC CATCGGGCGC CGCCGCGCCC TCGCGGGAAC CGCCCTGGCG
GCCCTCGGCC TTTGCATCGC GCCCTGGGCC ACTGCCCAGG AGCCGTGGCC GGCCAAGCCG
ATCAGCCTGG TCGTGCCCTT TCCTTCCGGC GGCACCACCG ACGTGCTGGC CCGCGCGCTC
GCCGATGCGC TGTCCAAGGC CCTGGGCCAG CCCGTGATCG TGGAAAGCAA GCCGGGCGCC
GGCGCCACGC TCGGCGCCGA CTACGTCGCC AAGGCCAGGC CCGATGGCTA CACGCTGCTG
ATGGGCGCGG TGCACCACAC CATCGCGACC AGCGTCTACA AGAAGCTGCC CTACGACTTC
CAGAAAGACT TCGCGCCGAT CACCACGGTG GCGATGGTGC CGAACGTGCT GGTGGTCAAT
GCCTCGCTCA CGCCGGCCAA GTCGGTGGCC GAGCTGGTCG CGCTTGCCAA GGCGTCGCCG
AAGGAGCTGG CCTACGGCTC CAACGGCAAC GGCACGGCGC AACACCTGAT CGGCACCCAG
TTCCAGGCCA GCACCGGCGT CAAGCTGCTG CACGTGCCGT ACAAGGGCAG CGGTCCGCTC
ACCACCGACC TGCTGGGCGG GCAGGTGGAC ATGTCCTTCG ACACCATCAC GCCCGTGCTG
CAGCACATCA AGGGCGGCAA GCTGCGCGCG CTGGCCGTCA CCACCGCCAA GCGTTCCGCC
GTACTGCCCG AGGTGCCGAC GCTCGAGGAG GCCGGGCTCA AGGGCTTCGA CATCGGCACC
TGGTTCGGCG TGCTCGCGCC GGCCGGAACG CCGAAGGACA TCACCGCAAA GCTCCACATC
GAGATGGCCA GGATCATCAA GTCGCCGGAG TTCGCCGAGC GGATGCGCGC GATCGGCGCC
GACCCGATCG GCGACAGCTC CGCCGAGATG GCGGCCCGCA TCCGCGAGGA GACGGCGAAG
TTCGCGAGGC TGGTCAAGGA GGGGAAGGTC GCGGTCGAGT AG
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| Protein sequence | MLKQPFAIGR RRALAGTALA ALGLCIAPWA TAQEPWPAKP ISLVVPFPSG GTTDVLARAL
ADALSKALGQ PVIVESKPGA GATLGADYVA KARPDGYTLL MGAVHHTIAT SVYKKLPYDF
QKDFAPITTV AMVPNVLVVN ASLTPAKSVA ELVALAKASP KELAYGSNGN GTAQHLIGTQ
FQASTGVKLL HVPYKGSGPL TTDLLGGQVD MSFDTITPVL QHIKGGKLRA LAVTTAKRSA
VLPEVPTLEE AGLKGFDIGT WFGVLAPAGT PKDITAKLHI EMARIIKSPE FAERMRAIGA
DPIGDSSAEM AARIREETAK FARLVKEGKV AVE
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