Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0957 |
Symbol | |
ID | 7970132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1053430 |
End bp | 1054038 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644791553 |
Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
Protein accession | YP_002942874 |
Protein GI | 239813964 |
COG category | [V] Defense mechanisms |
COG ID | [COG3023] Negative regulator of beta-lactamase expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.639508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGACGA CTGAAGCACC GGCAAGCAAC GACGACGGGC TCTGGCACGC CGGCTGGTAC CGCTTTGCCA AGGCGCTGCG CTCGCCGAAT TTCGGGCCCC GGCCCGCGGG CGCGCAGACC GACCTGATCG TGCTGCACTC CATCAGCCTG CCGCCCGGCG AATACGGCGG CGAGGCCGTG CAGCAGCTCT TCACCAACCA GCTCGACTGG GACGCGCACC CCTACTTCCA GTCGATCCGC GGCCTTGCGG TTTCCTCGCA CTTCTATGTG CGGCGCAACG GCGAGCTCTG GCAGTTCGTG AGCTGCGACG ATCGCGCCTG GCATGCCGGC GTGTCGTCGT GGCGCGGCCG CGAGAACTGC AACGACGACT CCATCGGCAT CGAGCTCGAA GGCCTCGAAG GCCAGCCCTT CGAAGAAGCA CAGTACGAGG CGCTGGCCAG CCTCTGCCCC GCCATCGCGC AGCACTACGC CATCGCGCAC ATCGCCGGCC ACGAGCACAT TGCGCCAGGC CGAAAACAGG ACCCCGGCGC CGGCTTCGAT TGGCAATTGC TGCGCGGGCA CCTCGGCTGG AGTCCACAGA TGTTTCCTCC GCAGGTGGTG CAGCGCTAA
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Protein sequence | MPTTEAPASN DDGLWHAGWY RFAKALRSPN FGPRPAGAQT DLIVLHSISL PPGEYGGEAV QQLFTNQLDW DAHPYFQSIR GLAVSSHFYV RRNGELWQFV SCDDRAWHAG VSSWRGRENC NDDSIGIELE GLEGQPFEEA QYEALASLCP AIAQHYAIAH IAGHEHIAPG RKQDPGAGFD WQLLRGHLGW SPQMFPPQVV QR
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