Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0945 |
Symbol | |
ID | 7970120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1039641 |
End bp | 1040150 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644791541 |
Product | protein of unknown function DUF985 |
Protein accession | YP_002942862 |
Protein GI | 239813952 |
COG category | [S] Function unknown |
COG ID | [COG3542] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGCCA TGCGCGCCCG CGAACTGATC GAGAGCCTGA AGCTGCAGCC CCACCCCGAG GGTGGCTGGT ACAGCGAGGT GTTCCGCTCG GCGGCGAGCG TCGTTCCCAC CGACGGCCGC ACGCCGCGCA GCGCGCTCAC CAGCATCTAC TTCCTGCTCG AGGCCGGACA GCATTCGCGC TGGCACCGGG TGCTGTCGGA TGAAGTGTGG GTGCACCTGG AAGGCGTGCC GCTGGCGCTC TGGACCTGCG ATGCCGCGCT GCGCACGGCG CCGGCCCATG TGCGCCTGGG CCCGGTCGAT GCGCACGGCA CGCGCCCCCA GCATGTGGTG CCGGCCGGCC AGTGGCAGGC CGCCCGGCCG ATCCAGGGCC ACGCGAGCGG CGACTACACG CTGGTCGCCT GCATGGTCGG CCCGGGCTTC GACTTCGCCG ACTTCTCCCT GGTGCCGCCG GACAGCGATG AAGCCGCCGC CATGCGGCAC CACTGGCCGG ACCTGGCCGG GATGCTTTGA
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Protein sequence | MTAMRARELI ESLKLQPHPE GGWYSEVFRS AASVVPTDGR TPRSALTSIY FLLEAGQHSR WHRVLSDEVW VHLEGVPLAL WTCDAALRTA PAHVRLGPVD AHGTRPQHVV PAGQWQAARP IQGHASGDYT LVACMVGPGF DFADFSLVPP DSDEAAAMRH HWPDLAGML
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