Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0913 |
Symbol | |
ID | 7970088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1003244 |
End bp | 1004992 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644791509 |
Product | Peptidoglycan glycosyltransferase |
Protein accession | YP_002942830 |
Protein GI | 239813920 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGCC GCAGCGTCCG CTACACCACC AGCCCCTTGC TCGCGAGCAA GACGCCGGTC TGGCGCAGCA AGTTCATCGT CGCCGGCATC GCCTTCGGCT TCGTGGTGCT GGCGGGCCGG GCCGCCTACG TGCAGGTGTT CAACAACAGC TTCTTCCAGC GGCAGGGCGA AGTGCGCTTT GCGCGCACGC TCGAGCTGCC GGCCAACCGC GGGCGCATCC TCGACCGCAA CGGCCTCATC CTGGCGTCCA GCGTGGTGGC GCCGAGCATC TGGGCCATTC CGGAAGACAT CGAGCGCGAC GACCCCGAGG TGCGCGCCAA GCTCAAGCAG GTGGCCAAGC TGCTCGAGAT GCCGCAGAAG GACTTCGACA AGAAGCTCGA GGACGAGGAC AAGACCTTCG TCTGGATCAA GCGCCAGGTC GACGAGCCGA TTGCCAAGCA GATTGCCGCG CTCAACCTCA AGGGCATCTA CCAGCGCAAG GAATACAAGC GCCAGTACCC CGAGGGCGAG GCCGCGGCGC ACGTGGTGGG CTTCACCAAC GTCGAGGACA ACGGGCAGGA AGGCATCGAG CTTTCCTTCA ACAAGGAGCT GGCCGGCAAG GCCGGGTCGC GCCGCGTCAT CAAGGACCGC CTGGGCCGCG TGGTCGAGGG CGTGGGCGAA CAGGTGCCGC CGGTCGACGG CAAGGACATC CAGCTCAGCG TCGACAGCAA GGTGCAGTTC TTCGCCTACC AGAAGCTGCG CGACGCCGTG ACCGCGCGCC GTGCCAAGGC CGGCAGCGTG GTGGTGCTGG ACGCGGTCAC CGGCGAGGTG CTGGCGCTGG CCAACTACCC GAGCTACGTG CCCGACAAGC GGCAGAACCT CACGGGCGAG CAGCTGCGCA ACCGCGCGCT CACCGACACC TTCGAGCCCG GCTCGACCAT GAAGCCGATC ACCGTGGCCA TGGCGCTGGA GGCCGGCCGC GTGAAGCCCT CGACGCTGAT CGAGACCTCG CCCGGCCGCT TCCAGCTGGG CGGCTTCACC ATCAGCGACA CGCACAACTA CGGAACGCTC ACGGTCGAGG GCGTGATCCA GAAGTCCAGC AACGTGGGCG CGCTCAAGAT CGCGCAGAAG ATGACCCCGC ACGAGATGTG GGACACCTAC ACCGCGCTCG GCTACGGCCA GAAGCCGCAG ATCCAGTTCC CCGGCGCGGT CACGGGGCGC CTGCGCCCCT GGAAGACCTG GAAGCCCGTG GAGCAGGCCA CGATGGCCTA TGGCTACGGC CTGTCGGCGT CGCTCTTCCA GATGGCGCAT TCGTACACCG CCTTCGCGCA CGACGGCGCG ATCATTCCGG TCACCATCCT CAAGAGCACC GAGTCGCCCG CGGGTGTGCG GGTGTTCTCG CCGTCGAACG CGCTGGCGGT GCGCAAGATG CTGCAGATGG CGGCAGGCCC GGGCGGCACC GGCACGCGCG CGCAGACCGT CGGCTATTCG GTCGGCGGCA AGTCGGGCAC CGCGCACAAG CAGGTTGGCA AAGGTTACGC GAGCAACAAA TATCGCGCGT GGTTCACCGG CATGGCACCG ATCGAAAAGC CGCGCATCAT CGTCGGCGTG ATGATCGACG AGCCGAGCGA CGGCCAGTAC TTCGGCGGCG TGGCCGCCGC GCCCGTTTTC AGCGAGGTCG TGCAGCAGAC CCTGCGCATG ATGAACGTTC CGCCCGACCT CGCGGTCAAA CCGCTGGTGG TGACGCAAGG CGTCGACGAG AGCTTCTGA
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Protein sequence | MSRRSVRYTT SPLLASKTPV WRSKFIVAGI AFGFVVLAGR AAYVQVFNNS FFQRQGEVRF ARTLELPANR GRILDRNGLI LASSVVAPSI WAIPEDIERD DPEVRAKLKQ VAKLLEMPQK DFDKKLEDED KTFVWIKRQV DEPIAKQIAA LNLKGIYQRK EYKRQYPEGE AAAHVVGFTN VEDNGQEGIE LSFNKELAGK AGSRRVIKDR LGRVVEGVGE QVPPVDGKDI QLSVDSKVQF FAYQKLRDAV TARRAKAGSV VVLDAVTGEV LALANYPSYV PDKRQNLTGE QLRNRALTDT FEPGSTMKPI TVAMALEAGR VKPSTLIETS PGRFQLGGFT ISDTHNYGTL TVEGVIQKSS NVGALKIAQK MTPHEMWDTY TALGYGQKPQ IQFPGAVTGR LRPWKTWKPV EQATMAYGYG LSASLFQMAH SYTAFAHDGA IIPVTILKST ESPAGVRVFS PSNALAVRKM LQMAAGPGGT GTRAQTVGYS VGGKSGTAHK QVGKGYASNK YRAWFTGMAP IEKPRIIVGV MIDEPSDGQY FGGVAAAPVF SEVVQQTLRM MNVPPDLAVK PLVVTQGVDE SF
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