| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0905 |
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| Symbol | |
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| ID | 7970080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 994730 |
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| End bp | 996247 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791501 |
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| Product | protein of unknown function DUF945 |
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| Protein accession | YP_002942822 |
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| Protein GI | 239813912 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5339] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGTCG ACCTCATTCA TACAAAAGAG AAATCAATCT TGAGCAAAAA AGCAGTTCTG
GGCGTGCTGG CTGCGGCCAT CGCACTTGCC TATGGCGGCG GCACGTGGTT GGCCGGCGCA
AAAGTAAAGT CCAGCTACGA AGCCGCGCTG GACGAGGTGC CGAAGCAGAC TGCGCTGGTG
CGCGTGGTCG AGCGCAGCTA CGAACGCGGC TTCTTCGGCG CCGTCAGCAC CGTGACGATC
GAGCTCGGCT GCGCAGCCGA TGCTGCCGCC GCGGTGCAGG TGCCTGCCGC CAAGCCCGGC
GAGGAAGAGG ATGAGGAAGA AGTGGAGCAA GCCGCCACGC CCTTCAAGGC GGTGCGCATC
ACCTTCCGCG ACACCATCCG CCACGGCCCG CTGGCCGGTG GCACGCTGGC GGCGGCCACC
ATCGACAGCG AACTGGTGTT CGACGTGAAG GGCCAGGCCA AGGCCGAGCA GATCTTCGGC
AAGGCCAAGC CCCTGACGGC GCACACCAAG GTGGCGTTCG ACGGCGGCTA CACCACCGAC
CTGGCGGTGG CGCCCGCCAG CCTGGCCGAG GAAGGCAAGG CCCGCTTCGC CTGGCAGGGC
GCGCAGGTCC GCGCCGAGAT GAACGGCGCC CGCACCCACG TGCGCTACGA ACTGGCGATG
CCGGGGCTGG ATGTCAGCGA TGCGCGCACC GGCGCCACGC TCAAGATGGG CAAGCTGGCC
GGCAAGGCCG ACATGGACAA GAGCGAGGGC TGGGTCCTGG CCACGGGCAA GACCGAGGCC
CGGCTCGACA GCCTCGAATT TGCGGCTCCC AAGGGTCTGG GCGGCGCCGC CGGCGGCGAA
GGCAAGGCCC TGCCGGCGGT GCTGCTGCAG AACATCGACA TGCTCGCCGA AGCCAGCATC
GCGGACGGGC TCTACGCATC GACCGGCACG GTCAAGGGCA CCGGCAAGAT CGGCGACACC
AAGATCGACA AGTTCGAGAT GAGCAGCGGC GGACGCCGCA TCCACGCCGC CGGCTACAAG
AAGCTGGCCG ATGCCTGGAT GCAGTCGAGC GCCGCGAACG GCTGCGGCAA GGGCGGCAAC
AAGGCCTCGC AGGCGGCCAT GAAGGTGCTG TTCGACCAGT TGGCGCCCGA CCTCAAGGCC
ATGGCCAAGT ACAGCCCCGA ATTCGGGCTC GACAGGATGC TGGTCGAAAT CGGCGGCAAG
CGCGGCGAGC TCAGCTACAC GGCCGGCATG GCCGGCGTCA CCGACGAAGA CCTGCAGGCG
CCCGGCATGG CGCTGCTCAT GAAGCGCGGC GTGCTCAAGG CCAGCGCGCG GCTGCCGATG
CAGTGGCTGG AGCAGATGGC CGCCGCCGGC GCCGGCAGCG GCCAGACGCC GCCGCCCGAG
ATGATGGCGG GGCTGGTCGA GCAAGGCGAG GAAAAGGGCT TCGTCAAGCG CGACGGCGGT
GACGTGACCG CGCAGATCGA ATATGCCGAA GGCAGCCTGA AGCTCAACGG CAAGCCGCTG
GGCGCGCCGG GCCGGTAA
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| Protein sequence | MQVDLIHTKE KSILSKKAVL GVLAAAIALA YGGGTWLAGA KVKSSYEAAL DEVPKQTALV
RVVERSYERG FFGAVSTVTI ELGCAADAAA AVQVPAAKPG EEEDEEEVEQ AATPFKAVRI
TFRDTIRHGP LAGGTLAAAT IDSELVFDVK GQAKAEQIFG KAKPLTAHTK VAFDGGYTTD
LAVAPASLAE EGKARFAWQG AQVRAEMNGA RTHVRYELAM PGLDVSDART GATLKMGKLA
GKADMDKSEG WVLATGKTEA RLDSLEFAAP KGLGGAAGGE GKALPAVLLQ NIDMLAEASI
ADGLYASTGT VKGTGKIGDT KIDKFEMSSG GRRIHAAGYK KLADAWMQSS AANGCGKGGN
KASQAAMKVL FDQLAPDLKA MAKYSPEFGL DRMLVEIGGK RGELSYTAGM AGVTDEDLQA
PGMALLMKRG VLKASARLPM QWLEQMAAAG AGSGQTPPPE MMAGLVEQGE EKGFVKRDGG
DVTAQIEYAE GSLKLNGKPL GAPGR
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