| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0856 |
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| Symbol | |
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| ID | 7972071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 943900 |
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| End bp | 944856 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644791454 |
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| Product | transposase IS116/IS110/IS902 family protein |
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| Protein accession | YP_002942775 |
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| Protein GI | 239813865 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAAG CGGTATTCAT AGGAATCGAC GTATCCAAGG ACACCCTGGA AGTTGCCAGC
AGCGCGCAAG CATCGAGTTG GCAGGCTGTC AACGACACCG CCGGCATCGA GGCGTTGAGT
ACGCAATTGC TGGCGATGGC GCCGGCGCTG GTGGTGTTGG AAGCCACGGG TGGCTACGAG
TTCGAGGCTG CCTGTGCGTT GCAGGCTGCA GGCCTGGACG TGGCGGTGGT CAACCCTCGC
CAGGCGCGCG ACTTCGCCCG TGCCATGGGC GCGCTGGCCA AGACCGACAG CCTGGATGCC
AGGATGCTGG CGGCATTCGC TCGGGTGCTG CACCAGCACC CCGAGCGCAG TCGATTCGTC
AAGCCGCTGG CCGACGAGGC CTTGCAACGC CTGCAGGCTT TGGTGCTGCG CCGCCGCCAA
TTGGTAGGCA TGCTCACCAG TGAGCGGCAA CGCTTGCGTA TGTCCCACGC CAGCGCCCGC
CCGAGCATCG AGCGCACGAT CGAGTTCCTC AAGGCGCAGA TCCACGACAT GGAGATCGAG
GCAGGCGAGC ACGTGCGAGC CCACCACGGC GCTCTGGCCG CGGCGCTGTC CAGCGTCAAG
GGCGTGGGAG CGGCCACCGT CTGCACGCTG CTGGCGGAGT TGCCCGAACT CGGACAACTC
TGCCGCAGGA GGATTGCAGC CTTGGTGGGC GTGGCCCCAT TGAATCGCGA CAGCGGCCAG
ATGCGCGGGC AACGCTCCAT CTGGGGCGGG CGCGCCGATG TGCGCAAGAC GCTCTACATG
GCCACCCTCG TCGCCGTGCG CCACAGCCCG GTCTTCAAAG CCTTTTACGA GCGACTGGTC
GCAGCCGGCA AGCCCAAGAA GGTCGCCCTG GTTGCGGCCA TGCGCAAGCT GCTGACCACG
CTCAACGCCA TTGCGAAGTC CGGAAAACAC TGGGAGGAAT CTCTCCACGC TTCTTGA
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| Protein sequence | MSEAVFIGID VSKDTLEVAS SAQASSWQAV NDTAGIEALS TQLLAMAPAL VVLEATGGYE
FEAACALQAA GLDVAVVNPR QARDFARAMG ALAKTDSLDA RMLAAFARVL HQHPERSRFV
KPLADEALQR LQALVLRRRQ LVGMLTSERQ RLRMSHASAR PSIERTIEFL KAQIHDMEIE
AGEHVRAHHG ALAAALSSVK GVGAATVCTL LAELPELGQL CRRRIAALVG VAPLNRDSGQ
MRGQRSIWGG RADVRKTLYM ATLVAVRHSP VFKAFYERLV AAGKPKKVAL VAAMRKLLTT
LNAIAKSGKH WEESLHAS
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