| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0824 |
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| Symbol | |
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| ID | 7972039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 907498 |
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| End bp | 908436 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791422 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_002942743 |
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| Protein GI | 239813833 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGACCA AGATTCCCCT GCTGGTGCTC AACAGCCTTT CGAGCGCCCA CCAGGCCCAG
ATTGCCGAGG TCTATGACAT GACTTATGCC TTCGACCCCG CCGCGCGCGC CGCCGCGATT
GCCGAGCACG GCAAGAAATT CCGCGCGGTG CTGACCATCG GCGTGATCGG CATCACGCCC
GAAGAAATTG CGGCCATGCC GGCGCTCGAG CTGATCTGCT GCCTGGGCGC GGGCTACGAA
GGCGTGCCGC TCGAAGTGAC GCGTGCGCGC GGCATTGCCA CCGCCAATGG CGCCGGCACC
AACGACGACT GCGTGGCCGA CCATGCCTTC GGCCTCTTGA TCGGCATCGT GCGCGAGTTC
CGCAAGCTCG ACCGGCTGTG CCGCGAAGGC GTGTGGCGCG AAGCCATTCC GCAGCCGCCG
AACGTGTCGG GCAAGAAGCT CGGCATCCTG GGGCTCGGCA CCATCGGCCA GAAGATCGCC
AAGCGCGCGG CCGCCTTCGA CATGGAGATC GGCTATCACA ACCGCAAGCC GCGCGAAGGC
GCGGCGCACC GCTACTTCGG CGACCTGAAG TCGCTGGCGG CCTGGGCCGA TTTCCTGGTG
CTGGCCGCGC CGGGCGGGCC GGCCACGCGC CATCTCGTGA ATGCCGAGGT GCTCGATGCG
CTCGGGCCGC AGGGCTACCT GGTCAGCATC GGGCGCGGCA GCGTGGTCGA TACCGAGGCG
CTGGCGGCGG CGCTGCGCGA GCACCGCATT GCAGGCGCGG GACTCGATGT GTACGAGAGC
GAGCCCAAGC GGCCCGAGCC GCTCATCGGC CTCGACAACG TGCTGCTGAC GCCGCACATG
GCGGGCTGGT CGCCCGAGGC CACGCAGAAG TCGGTCGACC ATTTTCTTGC GAATGCCGAA
GGGCACTTTG CGGGGCGGGG TGTGCTCACG CCGGTCTGA
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| Protein sequence | MSTKIPLLVL NSLSSAHQAQ IAEVYDMTYA FDPAARAAAI AEHGKKFRAV LTIGVIGITP
EEIAAMPALE LICCLGAGYE GVPLEVTRAR GIATANGAGT NDDCVADHAF GLLIGIVREF
RKLDRLCREG VWREAIPQPP NVSGKKLGIL GLGTIGQKIA KRAAAFDMEI GYHNRKPREG
AAHRYFGDLK SLAAWADFLV LAAPGGPATR HLVNAEVLDA LGPQGYLVSI GRGSVVDTEA
LAAALREHRI AGAGLDVYES EPKRPEPLIG LDNVLLTPHM AGWSPEATQK SVDHFLANAE
GHFAGRGVLT PV
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