Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0802 |
Symbol | |
ID | 7971854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 883881 |
End bp | 885566 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644791400 |
Product | 5-oxoprolinase (ATP-hydrolyzing) |
Protein accession | YP_002942721 |
Protein GI | 239813811 |
COG category | [E] Amino acid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.36294 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGACA CCCTCGACCC CGTCACGCTC GCCGTGCTGC GCGGCCGCCT CGAACAGGTG GCCGACGAGA TGGACGCCAC GCTCTACCGC AGCGCGTTCA ATCCCATCAT TGCCGAGGCG CACGACGCCT GCCACGGCCT CTACGACGCC ACCACCGGCG ACACGCTGGT GCAGGGCAAG TCGGGCCTGC CGGTGTTCGT GGGCGCGATG GCCTTCGCGG TGCGCGCCAC GGCGAAGGCC GCCGCGCCGC GCGGCGGCAT GCAGGACGGC GACATCTGGA TCAGCAACGA CGCCTACGAC GGCGGCACGC ACGCCAACGA CTTCAAGCTG GTCAAGCCCT TCTTCCGCAA CGGCAAGCTG TATTGCTACA TGGCCTCGGC CGCGCACTGG CACGACGTGG GCGGCGCGGT GCCCGGCAAC TACAACCCGG CCGCCACCGA GTGCTGGCAG GAGGCGGTGC AGATTCCGCC CGTGCGCATC GTGCAGGGCG GCGTGCTCGA CGCCGACGTG CTCGCCATCC TGCAGGCCAA CACGCGCCTG CCCGACAGCC TCTGGGGCGA CCTCAACGGC CAGCTCGCCG CGCTGGAGCT CGGCGCCAAG CGCCTGCACG GCCTGCTCGA CGAATACGGC GACGGCCTGG TGCTGAATGC GCTCGGCGAG CTGCGCAGCC GTGCGCTGCG CCTCATGCGC GCGCACATCG CCTCGCTGCC CGACGGCCGC TACAGCTTCG AGGACGTGCT CGACAACGAC GGCATCGTCA ACCAGCCGCT CACCATCGCG CTCGACATGA CGGTGGCCGG CGACCGGCTC ACGCTCGACT TCTCGCGCAC CTCGCCGCAA TGCGCGGGGC CGGTGAACAT CTCGCGCGCC ACGGCGGTCG CGGCCTGCTA CGTTGCGCTC AAGCACCTGT TCCCCGACGT GCCCGCGAAC GCCGGCGTGC TCGACGCGGT CGACTTCGTG ATTCCCGACA AGCTGGTGAT CAGCGCCGAG CGCCCGCGCC CGGTGGGCGG CTACACCGAG ACCATCCTGC GCATGATCGA CGTGATCTTC AGCGCCGCCG CGCAAGCCGA CTCCACGCGC GCCGTGGCGC AGGCCTACGG CACCATCAAC GCGCTGTCGA TCGCGGGCCA CCGCAGCGAC AAGGGCCGCG AAGGCCAGCG CTGGGTGATG TTCAGCTTCT TCGGCGGCGG CCACGGCGGC CACTCGGGCG GCGACGGCCT GTCGCACGGC AACGCGCCGA TCTCGACCGC GACGATTCCG CCGCTCGAAA TCCTCGAGGC CGCGTACCCC GTGCGCTTCA CCGAATGGTC GCTGCGCGCC GACTCGGGCG GCGACGGCCG GCACCGCGGT GGCCTCGGCG CCGTCTACGA GATCGAACTG CTCGAGAAGG ACGCCGAGGT GTTCGTCTTC GGCGAGCGCG GCACCTCGCC GCCCAAGGGC ATCGCGGGCG GCGGCGCGGG TGCCCTCAAC GTGTTCCGCT ACGAGAACGC GGGCGAGTGG CACACGCCGC CCATGGTGTC GAAGATGCGC GGCATCCAGC TTGCGCGCGG CGAGCGCGTG CGGCTCGAAA CGCCCGGCGG CGGCGGCTGG GGCCGCGCCG GCGAGCGCTC CGCTTCGCAG CGCGAAGCCG ATGCCGCCAT GGGCTACGTC ACGGCCGCTA GCAGCGGCAA GAAAGCATCC GAATGA
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Protein sequence | MNDTLDPVTL AVLRGRLEQV ADEMDATLYR SAFNPIIAEA HDACHGLYDA TTGDTLVQGK SGLPVFVGAM AFAVRATAKA AAPRGGMQDG DIWISNDAYD GGTHANDFKL VKPFFRNGKL YCYMASAAHW HDVGGAVPGN YNPAATECWQ EAVQIPPVRI VQGGVLDADV LAILQANTRL PDSLWGDLNG QLAALELGAK RLHGLLDEYG DGLVLNALGE LRSRALRLMR AHIASLPDGR YSFEDVLDND GIVNQPLTIA LDMTVAGDRL TLDFSRTSPQ CAGPVNISRA TAVAACYVAL KHLFPDVPAN AGVLDAVDFV IPDKLVISAE RPRPVGGYTE TILRMIDVIF SAAAQADSTR AVAQAYGTIN ALSIAGHRSD KGREGQRWVM FSFFGGGHGG HSGGDGLSHG NAPISTATIP PLEILEAAYP VRFTEWSLRA DSGGDGRHRG GLGAVYEIEL LEKDAEVFVF GERGTSPPKG IAGGGAGALN VFRYENAGEW HTPPMVSKMR GIQLARGERV RLETPGGGGW GRAGERSASQ READAAMGYV TAASSGKKAS E
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