| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0774 |
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| Symbol | |
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| ID | 7971826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 851713 |
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| End bp | 856143 |
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| Gene Length | 4431 bp |
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| Protein Length | 1476 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791372 |
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| Product | glycosyl transferase family 2 |
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| Protein accession | YP_002942693 |
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| Protein GI | 239813783 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAC CCACCCTCAT CCTTCCGACG GTCGACCGGT CGCTCGACGT GCTGACGCAC
CCGGTGCTGG ACCCGCTCTT CTGGACGCCG CACCTGCTCG GCAAGGCCAG CGCCTGGTGG
ACCCACACGC CGTTCGCGTT CTGGATCGTG GCCGCCTGCA AGCCGGGTTT GCTGGTGGAA
CTGGGCACGC ACAACGGCGT GTCGTATGCG GCGTTCTGCG AGGCGGTTGC GCGGCTCAAG
TCGGCCACGC GCTGCTACGC CGTGGACACC TGGGCCGGAG ACGAGCATGC CGGGCACTTC
GATGCGCAGG TCTACCACGA GCTGCGCGAC TTCCACGACA AGCACTTCAG CGCCTTCTCC
GAACTGCTCA AGTCCACCTT CGACGACGCG CTGCCGTACT TTGCCGACGG CTCCATCGAC
CTGCTGCACA TCGACGGCTT CCATACCTAC GAGGCGGTCA AGCACGACTT CGAGACCTGG
CTTCCCAAGC TGTCGGACAA GGCGGTGGTG CTGTTCCACG ACACCAATGT GCGCAGCGGC
AATTTCGGCG TCTTCCGCTT CTTCGCCGAG CAGGCACGGC ACTACCCGTC GTTCGAGTTC
CTGCACGGCC ACGGGCTCGG TGTGCTGGCC GTGGGCGACC GCGCGCCGGC CGCCGCCATG
GCGCTGTGCA ACCTCGAACC CGAACGCGCC GATGCCGCCA GGGCGCGCTT CGCGCACCTG
GGAACGCGCT GGTTCGTGAC CACGCGCGAA CAGCTCGGCT CGGCCGAACT GCATCAGCGC
ATCCATGAGG CCAATGCCCT GCGCGCGCCG GTGGAAGCCG AGCTGGCCCA GGTGGCGGCG
GCCCGCGCGG CCGAGGCCGA GGCCCGCGCC AGCGCCGAAG GCAAGCTGGA CGCCCTGTCC
CACGAGGTGG CCGAGAAGGC CGCGCAGTTG GAAGACCTGA ACCGGCAGGC CGGCGATGCG
CAGGCGAAGG CCGCCCAGGC CGAAGCCGCC GCGCGCGCGA CCGGCTTCGC CCACGAGCAG
GCGAACCGGC GCGTGGCCGA GCTGCGGAAT GTCGTGGCGC AGTTGGCCAC CGACCTGAAC
AAGACCCGCG ACGACCTGAA CGAGACCAGC GAAGCCAAGA GCCTGCAGCA GCGCACCGCG
CTGGCCTGGA AGAACCTTGC CGACCGGAAG GAAGACCGGG TCGAATCGTT GATGGAGCGC
TTCACGCGCC TGCGGGTCGA TCCCTCCCTG AGCGTGAAGG CCAAGCTGCG CAGGCGCCTG
CGGCTGCTTG CCCGGCGCCT TGCCGGCAAG CCGGTGGACC TGGGGGCGGT GGAGATCGTC
CGGTTCTCGC CCTACTTCGA TCGCGAGTGG TACCTGAAGA CCTACCCCGA CGTCGCATCG
GCCGGCACGG ACCCCGCGGA GCACTACGTG ACCCACGGCG CGGCCGAAGG GCGCCAGCCC
GGCCCATGGT TCTCGGGCAC CGAATACGCG GCGCGCTACG GGGACGCCGC GGGCTTCAAT
CCGCTGATTC ACTACACGCT GGTGGGTGCG CGAGAGGGCC GGCGCGCCGG CCTGCTCGGC
AGCGACGACA CCGAGCCGCC GCCCATTCCT CCATTGCCGA GCCGGGTGTT CTCGATCTTC
TACGTTTCGG GCGAGGCGGA TACGCCCGGC CATCTGTACC GGGTCGCGCG CTACATCGAG
GCGGCGCGGA TGAACGGCGT GCCGGCGGAA TGGGTCCGGC AGGAAGAGCT GGAGGCGCGG
CTCGAGCTGA CGTCGCGGCA CGACGTGATG ATTCTCTGGC GCACCCAGTG GAGCCCGGTG
CTCGAAAAAG CCATCGGCCT GATGCATGCG CAAGGCAAGA AGGTGGTGTT CGACATCGAC
GACCTGATGA TCGAACCCGA CCTGGCCGAC ACCAAGGTGA TCGACGGTAT CCGCTCCAAC
GCCCATCCGG AAGCCGCGGT GCGCGAGCTC TTCGCGAGCG TGCGCCGCGC CATGCTCGCG
GCCGACGTCT GCATTGCCAG CACCCAGGAG CTGGCCTACC ACATGCGCTG GGCGGGCAAG
TCCACCCATG TGCTGTTCAA CGGCTTCGAC GACCAGACCT TCGAGCTCTC CAGGCGCAGC
GCCCGGCAGT GGCGCAGCGC GCGGACCGAC AACCTGGTGC GCATCGGCTA TGCCGGCGGC
TCGCGGACGC ACCAGCGCGA CCTGGGCCTG GCCATCGAGG CGATTGCGCG CGTGCTGCGC
GAGAACGATC TGTGCCGGCT GGTGCTCTTC CAGACCGAAT CGGGCATGCG CCTGGTCGAC
GTGGAGGAAT ACCCGGTGAT GGCCGGCCTG GCGCACCGCA TCGAATGGCG GCCCTTCCAG
ACCCTGGAGA CGCTGCCGCG CGAAATTGCG CGCTTCGACA TCAACATCGC GCCGCTGGAA
TTCGGCAACC CCTTCTGCGA GGCCAAGAGC GAACTGAAGT TCTTCGAGGC CGCGCTGGCC
GACGTGCCGA CCATCGCATC GCCGACCGGC CCGTTCACGC GGGCCATCGA GCATGGCGTG
TCGGGCTTCC TGGCCGCGAG CGCCGACGAC TGGTACCACC ATCTGTCGAC CCTGGCGTCG
GACCCGGCGC TGAGGGCCAG TGTCGGCTCG GCCGCGTTCC TGCGCGCGAT GGCCTCGTAC
GGGCCGCTGC AGCGGGCCAC GCAGTTCGGC CGCGTGCTCG ACCAGCTGCA AGGCGATGCG
CTGGCCGCGC GGGCCTTCGC GCTCGATGCC CGCGTGCGCT CGGCGCCGAT CCCGCGGCCC
CAGCTGATGC CGCTGGAAGT GCTGTTCGAG CACCGGGCCG ACGAGGCCGA GATTGCGGAC
GTCACGGTGG TCATTCCGCT CTACAACTAC GAGCAGTTCA TCGTCGAGGC GCTGGAGTCC
GTGCGTGCCC AGACGCTGGC GGTGCTGGAC CTGGTGGTGG TGGACGACTG TTCGACCGAC
GGTTCGCTGG ACGCCGTGCT GGCATGGGCC CGGCAGCACG CCAGGCGCTT CAACCGCGTG
GTGGTCGCGC GGCATGAGGC CAACAGCGGC CTGGGCCTCA CGCGCAATGC GGGCTTTCAC
CTTGCGGACA GCCCCTATGT GCTGCCGCTG GATGCCGACA ACCGGCTGCG CCCGAAATGC
TGCGAAGAGC TGCGCCGCGC CATCCGCGCC GAGCGCGTGG CCTTCGCCTA CCCGACCATC
CAGCACTTCG GCGCCTCCAG CGCGCTGCTC GGCGATGCCT CCTACGAGCC GCAGCGCTTC
GTGGCCGGCA ACTACATCGA CGCGATGGCG CTGGTCTCGA AGGAGGCGTG GGCGATCGTC
GGCGGCTACA ACCACGTTCG CCACGGCTGG GAAGACTTCG ACTTCTGGTG CCGGCTCGCG
GAGCAGGGCC AGCGCGGCGT GCGGGAGGCG CAAACGCTCG CGGACTACCG CGTGCATGCG
AGCTCGATGC TCAAGGCCGA GACCACGGTC CCGCAGAATT ACCAGCGGCT GATCGAGAAC
TTCAAGGCCC AGCATCCCTG GGTGTCGCTG ATCGACGAGC GGCTCGCGCG CAAGCCGCCG
GCGCTGCAGG TGGCGCTGAG CGACGGCGGC GCGAAGTCGC GGCTCCAGGC GCTGCTGCCG
ATTCTTCGCT GTCCCAAGAC CGGGCTCAAG CTGACGGCCG ACGCGGCAAG CGGCGCACTG
GCGACCGTGG ACGGCTGGCG GCGCTGGCCC GTCGTCCAGG GCCGGCCGGT CCTTTGCGAG
GACATCGGCG AGCCCGAGGT CAAGCCCGCC GAGCACGTCA GCAACCCGCT GCCGCCCGAA
GCCCTGAAGC TCGCCAAGAG CACCAAGGGG TGGGTGCTGA ATCTCAGCGG CGGAGGCTCG
CAGGAAAAGA TCGAGAACAT GGTCGAGGTC GAATACTGCC TGTTCAGGCA CACCGACGTG
GTCGCCGACG CCCACGTGCT GCCGTTCGAC GATGCGGTCT TCGACGCCGT GATCGTCATG
AACGCCTTCG AGCACTACCG CGAACCGCAG AAGGTGGCGG CGGAACTGCT GCGGGTGCTC
AAGCCCGGCG GCCGCATCCT GGTGCGCACC GCCTTCATGC AGCCGCTGCA CGAGCGGCCC
TGGCATTTCT TCAACTGCAC CCGCTACGGG CTGGAGCAGT GGTTCCGCGA GTTCGAGGCC
GAGCGCGTGC GGGTGTCGGA GAATTTCGCG CCGAACCACT CCGTCAGTTG GCTGGCGTCG
GAGTGCGAGC AGGCGCTGCG CGCCAACGTG TCCGACGAAG CCGCGGAGCG CTTCCGGGAG
GCCCCCGCGG GCGAGCTGGT GGACCTGTGG CGCGATCCGT CGCTGCGCGA TACGCCGCTG
TGGACCGATT TCGAGAAGCT GCCCCAGTCG GTGCAGGAGG TCGGCGCCGC GGGCTTCGAG
TTCCTGGGCC GGAAACCCGC GGTGGCGAGG GCGGGCGCGA ACGGCTGCTG A
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| Protein sequence | MKEPTLILPT VDRSLDVLTH PVLDPLFWTP HLLGKASAWW THTPFAFWIV AACKPGLLVE
LGTHNGVSYA AFCEAVARLK SATRCYAVDT WAGDEHAGHF DAQVYHELRD FHDKHFSAFS
ELLKSTFDDA LPYFADGSID LLHIDGFHTY EAVKHDFETW LPKLSDKAVV LFHDTNVRSG
NFGVFRFFAE QARHYPSFEF LHGHGLGVLA VGDRAPAAAM ALCNLEPERA DAARARFAHL
GTRWFVTTRE QLGSAELHQR IHEANALRAP VEAELAQVAA ARAAEAEARA SAEGKLDALS
HEVAEKAAQL EDLNRQAGDA QAKAAQAEAA ARATGFAHEQ ANRRVAELRN VVAQLATDLN
KTRDDLNETS EAKSLQQRTA LAWKNLADRK EDRVESLMER FTRLRVDPSL SVKAKLRRRL
RLLARRLAGK PVDLGAVEIV RFSPYFDREW YLKTYPDVAS AGTDPAEHYV THGAAEGRQP
GPWFSGTEYA ARYGDAAGFN PLIHYTLVGA REGRRAGLLG SDDTEPPPIP PLPSRVFSIF
YVSGEADTPG HLYRVARYIE AARMNGVPAE WVRQEELEAR LELTSRHDVM ILWRTQWSPV
LEKAIGLMHA QGKKVVFDID DLMIEPDLAD TKVIDGIRSN AHPEAAVREL FASVRRAMLA
ADVCIASTQE LAYHMRWAGK STHVLFNGFD DQTFELSRRS ARQWRSARTD NLVRIGYAGG
SRTHQRDLGL AIEAIARVLR ENDLCRLVLF QTESGMRLVD VEEYPVMAGL AHRIEWRPFQ
TLETLPREIA RFDINIAPLE FGNPFCEAKS ELKFFEAALA DVPTIASPTG PFTRAIEHGV
SGFLAASADD WYHHLSTLAS DPALRASVGS AAFLRAMASY GPLQRATQFG RVLDQLQGDA
LAARAFALDA RVRSAPIPRP QLMPLEVLFE HRADEAEIAD VTVVIPLYNY EQFIVEALES
VRAQTLAVLD LVVVDDCSTD GSLDAVLAWA RQHARRFNRV VVARHEANSG LGLTRNAGFH
LADSPYVLPL DADNRLRPKC CEELRRAIRA ERVAFAYPTI QHFGASSALL GDASYEPQRF
VAGNYIDAMA LVSKEAWAIV GGYNHVRHGW EDFDFWCRLA EQGQRGVREA QTLADYRVHA
SSMLKAETTV PQNYQRLIEN FKAQHPWVSL IDERLARKPP ALQVALSDGG AKSRLQALLP
ILRCPKTGLK LTADAASGAL ATVDGWRRWP VVQGRPVLCE DIGEPEVKPA EHVSNPLPPE
ALKLAKSTKG WVLNLSGGGS QEKIENMVEV EYCLFRHTDV VADAHVLPFD DAVFDAVIVM
NAFEHYREPQ KVAAELLRVL KPGGRILVRT AFMQPLHERP WHFFNCTRYG LEQWFREFEA
ERVRVSENFA PNHSVSWLAS ECEQALRANV SDEAAERFRE APAGELVDLW RDPSLRDTPL
WTDFEKLPQS VQEVGAAGFE FLGRKPAVAR AGANGC
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