| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0772 |
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| Symbol | |
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| ID | 7971824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 849647 |
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| End bp | 850744 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791370 |
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| Product | glycosyl transferase family 4 |
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| Protein accession | YP_002942691 |
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| Protein GI | 239813781 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGCTC TGATCGTCAT CAGTTTCTTC GTCTCGGCCT TCGGGGTCCA GGTGTTCATG
CGCCGCGCGC GCAGGCACGC CCGGCTCTAC GGCGCCGACA TGCCCCAGCG CTTCCACAAG
GGCCACGTGC CGCGGCTCGG GGGGGCGGGC ATCCTGCTGG GCATGGGCGC GGCCTGGCTG
GCCTCCGGCA TCACCGGCAC CGACCCGTTC AACGTCTCCT GGCCGCTCAA GACTTCGATG
CTCACGCTGC TGTGCATTGC GCCGGCGGTG CTCGGCGGCA TCGTCGAAGA CGTGACGCAG
AACGTCAAGG TGCGCTACCG GCTCGCGCTC ACCATCGGCT CCGCGCTGCT CGCGTGCTGG
GTGCTGGGCC TTGGCCTGTC GCGCACCGGC ATCGAGGCGG TCGACGGTTG GCTGGCCCTG
GTGCCGTACG GTGCCGTGCT GTTCGCGGCG CTGGCCATCG GCGGGCTGCC GCATGCCTTC
AACATCATCG ACGGCTACAA CGGGCTGGCC GGCACGGTGG CGGTGCTGGT GTGCCTGGCC
GTTTCGCACG TGGCGCTGCA GGTGGGCGAC CGCCAGCTCG CGGCGATGAT GGTCTGCCTG
GTCGGCGCCA CCATCGGCTT TTTGATCTGG AACTATCCGC GCGGCAAGAT CTTTGCCGGC
GACGGCGGCG CCTACGTGTG GGGCATGGTG ATTGCGCTGG CCTGCGTGAC GCTGGTGCAG
CGGCACCGCG TCGTCTCGCC GTGGTTCCCG ATGCTGCTGC TGATCTACCC GGTGTGGGAG
ACGCTGTTCT CCATCTACCG CAAGCTCGCG CGCGGGCAGT CGCCCGGCAC CGCCGATGCG
CTGCACTTCC ACCAGCTGAT CTTCCGGCGC ATCGTGCGCG TGGCCTTCGC GGACGACGAG
GCGCGCCAAC TGCTCGCCCG CAACAACCGG ACCTCGCCCT ACCTCTGGAT GTTCGCCGCG
CTGTCGGTGG TGCCGGCCGT GCTGTTCTGG AACAACACCA TCGTGCTGAT GCTGTTCTGC
CTGCTGTTCG TCACGACCTA CGTGGGCGCC TACCTGATGA TCGTGCGGTT CAAGGTGCCG
CGCTGGCTGC GCCCGTGA
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| Protein sequence | MIALIVISFF VSAFGVQVFM RRARRHARLY GADMPQRFHK GHVPRLGGAG ILLGMGAAWL
ASGITGTDPF NVSWPLKTSM LTLLCIAPAV LGGIVEDVTQ NVKVRYRLAL TIGSALLACW
VLGLGLSRTG IEAVDGWLAL VPYGAVLFAA LAIGGLPHAF NIIDGYNGLA GTVAVLVCLA
VSHVALQVGD RQLAAMMVCL VGATIGFLIW NYPRGKIFAG DGGAYVWGMV IALACVTLVQ
RHRVVSPWFP MLLLIYPVWE TLFSIYRKLA RGQSPGTADA LHFHQLIFRR IVRVAFADDE
ARQLLARNNR TSPYLWMFAA LSVVPAVLFW NNTIVLMLFC LLFVTTYVGA YLMIVRFKVP
RWLRP
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