| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0767 |
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| Symbol | |
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| ID | 7971819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 842796 |
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| End bp | 844604 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644791365 |
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| Product | glycosyl transferase family 2 |
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| Protein accession | YP_002942686 |
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| Protein GI | 239813776 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1216] Predicted glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAGTA AGCCCACGCT GCCAGCCGCG CAGCCCCATA TCCGGCGACG CGGGCTCGAG
GGCGGCTTGA GCAGTGCGCA GCTTCAGCGC CAGATCGCAT TGCTCGAGCA CGAGTCGAAG
TCCTTGGAAG CGCAGATCCT GGGGATGCAG CGGTCGACCA GTTGGCGTAT CACAGCGCCG
CTGCGCTGGG CGAGCCGGCA TATTCAACGC GTCGTGCGGG GTGCGTCCTT GCCGCAGGTT
GAGGAACGCG GAGACTACAC CGATTGGGTC GAGCGTTACG ACGGGCGCGA TACGGCCGGC
CACGATCGCA AGCGCCGGGA AGTCGATGCC TGGCCGAAGC GTCCGCGTTT GCTGCTGATG
CCCGCAGGTG AATTGGGCGC AGGCTCACTT GACGCACAGT TGTACAACGA ATGGACGAGG
CGGCCGGCCG GATCATTGCC CAGCGGCTTC AAGGCGGCGG CTTCCGCCGA CTGGGTCATC
TGGATCGAAC CGGGCTGCAC GCTGCCGCCG CACGCGCTGT GGGCTATTGC CCACCAGGTT
GTTGCGCACC CCGACGCCCG CTTGATCTAT GCCGACGAAG ACGAGCTGGG TGCAGACGGA
AAGCGCATCC GTCCATTTTT CAAGCCCGAC TGGAATCAGG ACCTTTTGCT CGGCCGCAAT
CTCTTTTCCT CATGGGTTGC CATGGAGGCC GGCCTGTTCG ATGAAGTCGG CGGACTTCGT
GCAGAGTTGG CGCCGCCCGA ACAGGGCTAT GACCTCGCGC TGCGCTGCGT GGAGCGTGTT
GGCAGCGAGC AGATACGCCA CATTCCACAC GTGCTCGCTC ATCGCCATGC TTCCGAGGCC
GAGCCCGGTG GCCGTCCGGC GGGTGTTGCC GTGCTGAATG CCCATTTCGA GCGAGTCGGC
ACCGCAGCCA GGGCCGAGGC CACGCAGTTT GGCTATCGCA CCCACTATGC GTTGCCCTCT
TCGCCGCCGC TGGTTTCACT CATCATCCCG ACGCGCAACG CATTGCCGCT GGTGCAGCAG
TGCATCGAGA GCATCGTGCT CGAGACGGAC TATCCGAACT ACGAAATCCT GCTGGTCGAC
AACGGATCGG ACGACCCCGA AGCGCTCGCC TACTTTGCCG CGCTTGATGT GCAGCAGGGC
ATCACCGTCA TCCGCGACGA GCGTCCGTTC AACTATTCGG CGCTGAACAA TGCGGCGGTT
GCAAGGGCGC AGGGCGAGCT TGTTGCGCTG CTAAACAATG ACATCGAGGT CGTCTCGCCC
GACTGGCTTG CGGAGATGGT GTCGATTGCC TTGCAGCCGG GGGTGGGCGC TGTTGGCGCG
AAGCTGCTTT ATCCCGACAC GACTGTCCAG CACGGGGGCG TGATTCTCGG CGTAGGCGGT
ATCGCAGGCC ACGCACACAA GCACCTGGCT CGCTCGGACC CCGGCCATGG CGGACGTGCA
CAGCTTGCGC AGTCTTTCAG CGCCGTGACT GCGGCCTGCC TGGTTGTGCG CAAGGCGCTT
TACGAGCAAG TCGGCGGCCT TGACGAGGCG CATCTCGGCG TCGCCTACAA CGACGTCGAT
TTCTGCCTGC GTTTGCGCCA AGCCGGATTC CGCAACGTCT GGACGCCCTG GGCCGAGCTG
CTGCACCACG AATCGGCCAC GCGCGGGCTC GAGGTGGCGG CCGAGTCGCG GAATCGGCTG
GCGGCCGAAG CGGCGGTCAT GCAGGACCGC TGGGGCGAGC TCATCGCGCA TGATCCAGCC
TACAACCCCA ACCTGACGCT CGATAGCGAA GATTTCGATC TTGCGTGGCC GCCGCGTACG
TCCCTATGA
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| Protein sequence | MFSKPTLPAA QPHIRRRGLE GGLSSAQLQR QIALLEHESK SLEAQILGMQ RSTSWRITAP
LRWASRHIQR VVRGASLPQV EERGDYTDWV ERYDGRDTAG HDRKRREVDA WPKRPRLLLM
PAGELGAGSL DAQLYNEWTR RPAGSLPSGF KAAASADWVI WIEPGCTLPP HALWAIAHQV
VAHPDARLIY ADEDELGADG KRIRPFFKPD WNQDLLLGRN LFSSWVAMEA GLFDEVGGLR
AELAPPEQGY DLALRCVERV GSEQIRHIPH VLAHRHASEA EPGGRPAGVA VLNAHFERVG
TAARAEATQF GYRTHYALPS SPPLVSLIIP TRNALPLVQQ CIESIVLETD YPNYEILLVD
NGSDDPEALA YFAALDVQQG ITVIRDERPF NYSALNNAAV ARAQGELVAL LNNDIEVVSP
DWLAEMVSIA LQPGVGAVGA KLLYPDTTVQ HGGVILGVGG IAGHAHKHLA RSDPGHGGRA
QLAQSFSAVT AACLVVRKAL YEQVGGLDEA HLGVAYNDVD FCLRLRQAGF RNVWTPWAEL
LHHESATRGL EVAAESRNRL AAEAAVMQDR WGELIAHDPA YNPNLTLDSE DFDLAWPPRT
SL
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