| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0761 |
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| Symbol | |
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| ID | 7971813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 834230 |
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| End bp | 836476 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644791359 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_002942680 |
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| Protein GI | 239813770 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCTA CACAAGAAAA AAGGCCTAGC GTCTCTATCG TCATCAACAC CCTCAACCGG
GGGCCGAGCC TTCACGCGAC CATCGAGAGC TTTCAGTGGC TCCGTTATCG AGGGGATTTC
GAGGTCATCG TCGTCAACGG TCCTTCGACA GACAACTCTG AAGAGATCAT CGCTCGATGG
GCAGGCCGCA TCCGGGCCGC GCGGTGTCCG GTTGCCAATC TCTCCGTCTC GAGAAACATC
GGCATATGTC TCGCGCGCGG TGAGGTCGTC GCGTTCATCG ACGACGACGC CATCCCCGAG
CCTGAATGGC TGGAGCAGTT GGCGGTGGCC TATGAAGATC CGCAGGTCGG TGCAGCCGGC
GGCTTCGTGT TCGATCACAC TGGATACGAC TTTCAGGCTC AGTACTGCGT GATCGATCGC
TTCGGCCACG GGGACTCCTC AGTCCGGACG CCGATGCCGC ACCTGTCCTA TCCTAAGAGC
CTGCGCTTTC CCCACCTTCT TGGCGCGAAC TCGTCGTTCA AGACCTCCGC GCTACTCGAG
ATCGGAGGAT TCGACGAAGA GTTCGAATAT TTTCTCGACG AAACCGACGT TTGCGCGCGC
ATCGTCGATG CTGGGTATCT CATTGCACAG CTCCCCAATG CGTACGTTCA TCACAAGTTC
GCGCCGAGCA ATATCCGCGG GGTCAATCGG ATACCACGCC ATCGCTACCC GATCATCAAG
AACAAGATCT ACTTCATCCT GAAGCATGCG CGAGAGTTCT ATCCACCCGA AGTGCTGCTA
CGCGAGCAGT CGACTTTCAT CGAATATCAA CGCACGGAGA TGGCGTCGGC TTTCGAGGCA
GGCCTGGTTT CCGCCGAGGA CGTCGCAACG TTCAATCGGG ATGTCGAGCG TGCGGTCGAA
GTCGGGTTGC GCCGCGGACA AGAAGGCCCA AAGCCGGACG CAATGATCGA CGAGGCAAAG
CGAAGGGCCT GGCCCGGGGA GTTCATGCAG TTTCCCCGGT TGGCCGATAC CGATCAGTGC
ACGCTAGTAC TGATCTCTAG GGGCTATCCG CCGGATCACA GCCACGGCAT CGCGACCTTC
AGCCGGGACT TGGCGGAAGC CTATGCCGCG CGCGGCAACA TCGTCCACGT CATTGCACAG
AGCCCCGACA TCAATCGGGT CGATTTTGAA AGTGGGGTAT GGGTCCACCG GATCGTCCCG
AAAAACTGCC TTCCTTCACC GGAGTCCGCA GAAATTGGAT TGCCGCAGGA CATCTGGAAT
TGGTCGGCGA GTGCGCATGC CGAAACTGCA CGGATCGCGA CGCATCGCAC AGTCGATGTC
GTTGAGGCTC CGATCTGGGA TTGCGAGGGC GCGGCCTTCT TGTTCGACCA CCGATGGCCG
TTGGTCACAA GCCTCCATAC GACGCATCAT TTCTGGCTGG ACTCGCATCC AGAACGGCGA
CAAGATCCCG AGTGGATGGC GTCCTACAGT ACGCCACTGC TGAAAGCCGA ACGACTGCTG
ATGGAGAATT CCGACGGGGT TCGAGCTAAC AGCCGAGCAA TTCGCACAGA AATCGAGAAG
GCATACGGCT TCCGATTCGA CGATACAAGG GTCCAAGTCA TACCGCACGG CTTGAAGCCA
GCCAAGATCG TCGAGACAGC GACAGACGAT GCTGCAATCG TCGTTCTCTT TGTAGGCCGC
TTGGAAGTAC GCAAAGGCAT CGACGTGCTA CTCGACGCCA TACCGCACGT GCTCGAAGAG
GTGCCATCCC TGGTCTTTAG GATCATCGGG GACAAAAGCC AACTCTCGCC TTCCGGGAAG
ACCTACGCCG AGGACTTCCT TGCATCAGAG AGCGGCAGAA AGTTCGCCGC ACAGGTCCGT
TTCGAAGGTC ACGTCGATGC GGCGACGCTC AGTGCAGCGT ATGCGAGCTG TGATGTTTTT
GTAGCACCGA GCCGATTCGA GTCATTTGGT CTAGTTTTTC TCGAAGCAAT GCGCGTGGCA
AAACCGGTCA TAGGATGCTC GGCGGGCGGA ATGCCGGAGG TGGTCGAAGA CGGCGTATGT
GGCCTGCTTG TCCCCCCCGG AAACACCGCA GCACTCGCAC AGGCCATTCT GCGGCTGGTG
CGATCCGAAT CCCTCAGGCA GCAGTTCGGC CAAGCAGGTC ACGAGCGATT CCGTGAACAC
TTCTCTGTAG CCCGAATGGC CGCGCAGAGC GCCGCTCTCT ACAAGACAGT TCGAAACATC
CGGCCCGCCC AACCGAACGA ACGATGA
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| Protein sequence | MKATQEKRPS VSIVINTLNR GPSLHATIES FQWLRYRGDF EVIVVNGPST DNSEEIIARW
AGRIRAARCP VANLSVSRNI GICLARGEVV AFIDDDAIPE PEWLEQLAVA YEDPQVGAAG
GFVFDHTGYD FQAQYCVIDR FGHGDSSVRT PMPHLSYPKS LRFPHLLGAN SSFKTSALLE
IGGFDEEFEY FLDETDVCAR IVDAGYLIAQ LPNAYVHHKF APSNIRGVNR IPRHRYPIIK
NKIYFILKHA REFYPPEVLL REQSTFIEYQ RTEMASAFEA GLVSAEDVAT FNRDVERAVE
VGLRRGQEGP KPDAMIDEAK RRAWPGEFMQ FPRLADTDQC TLVLISRGYP PDHSHGIATF
SRDLAEAYAA RGNIVHVIAQ SPDINRVDFE SGVWVHRIVP KNCLPSPESA EIGLPQDIWN
WSASAHAETA RIATHRTVDV VEAPIWDCEG AAFLFDHRWP LVTSLHTTHH FWLDSHPERR
QDPEWMASYS TPLLKAERLL MENSDGVRAN SRAIRTEIEK AYGFRFDDTR VQVIPHGLKP
AKIVETATDD AAIVVLFVGR LEVRKGIDVL LDAIPHVLEE VPSLVFRIIG DKSQLSPSGK
TYAEDFLASE SGRKFAAQVR FEGHVDAATL SAAYASCDVF VAPSRFESFG LVFLEAMRVA
KPVIGCSAGG MPEVVEDGVC GLLVPPGNTA ALAQAILRLV RSESLRQQFG QAGHERFREH
FSVARMAAQS AALYKTVRNI RPAQPNER
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