| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0757 |
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| Symbol | |
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| ID | 7971809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 827432 |
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| End bp | 828472 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644791355 |
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| Product | GDP-mannose 4,6-dehydratase |
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| Protein accession | YP_002942676 |
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| Protein GI | 239813766 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA AATGCGCTGT CGTCACCGGT ATCACAGGCC AGGACGGAGC CTACTTGGCC
GAGCTACTGC TTTCAAAAGG TTACGTCGTC CACGGCACCT ATCGCCGCAC CAGTTCGGTC
AACTTCTGGC GTATCGAGGA GCTTGGCATT CAGGCTCATC CCGACCTTCA TCTCGTGGAA
TACGACCTGA CGGACCTGGG CAGTTCGATT ACGCTGATCA AAGATGCAAA TCCCGACGAG
GTCTATAACC TCGCGGCACA GAGCTTCGTC GGCGTCAGCT TCAATCAGCC TGCCGCCACG
GCGCAGATCA CGGGCATCGG CGCGCTTCAC CTGCTCGAAG CCATCCGCCT GGTCAATCCC
AAGATTCGCT TTTACCAAGC TTCGACCTCT GAAATGTTCG GCAAGGTGCA GGCCATTCCC
CAGATAGAAG ACACCCCCTT CTACCCACGC AGCCCCTATG GCGTGGCCAA GCTCTACGCC
CACTGGATGA CCATCAACTA CCGTGAGAGC TATGACATCT TCGGTTGCAG CGGCATTCTT
TTCAATCACG AGAGCCCATT GCGCGGCCGA GAGTTCGTCA CCCGCAAGAT CACTGACGGC
GTCGCGAAGA TCAAGCTGGG CAAGCTCGAC GTGCTGGAGC TAGGAAATCT CGACGCCAAG
CGCGACTGGG GCTTTGCCAA GGAATATGTC GAGGGTATGT GGCGGATGCT GCAGGTCGAC
GAGCCGGACA CTTACGTGCT TGCCACCAAC CGTACGGAAA CGGTGCGTGA TTTTGTCAGC
ATGGCTTTCA AGGGCGCTGG CATCACTGTC GAGTTCAAAG GCGCAGGAGA GACGGAGTCC
GCGGTCGACA CGACTACCGG CAAGACCGTG ATGCGGATCA ATCCGAAGTT CTATCGCCCG
GCCGAGGTGG AGCTTTTGAT TGGCAACCCT GCAAAGGCTA AAGAAAAACT CGGCTGGGAA
CCCTCCACTA CTTTGGAGCA ACTCTGCCAG ATGATGGTGG AGGCGGACAT TCGACGCAAC
GGGCAGGGGT TTTCGTTTTG A
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| Protein sequence | MKKKCAVVTG ITGQDGAYLA ELLLSKGYVV HGTYRRTSSV NFWRIEELGI QAHPDLHLVE
YDLTDLGSSI TLIKDANPDE VYNLAAQSFV GVSFNQPAAT AQITGIGALH LLEAIRLVNP
KIRFYQASTS EMFGKVQAIP QIEDTPFYPR SPYGVAKLYA HWMTINYRES YDIFGCSGIL
FNHESPLRGR EFVTRKITDG VAKIKLGKLD VLELGNLDAK RDWGFAKEYV EGMWRMLQVD
EPDTYVLATN RTETVRDFVS MAFKGAGITV EFKGAGETES AVDTTTGKTV MRINPKFYRP
AEVELLIGNP AKAKEKLGWE PSTTLEQLCQ MMVEADIRRN GQGFSF
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