Gene Vapar_0755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0755 
Symbol 
ID7971807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp826007 
End bp826555 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content61% 
IMG OID644791353 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_002942674 
Protein GI239813764 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGGCAA CACCTACCGC GATTCCTGAA GTGCTGGTCA TCGAGCCGAA GGTCTTCGGC 
GATGCGCGCG GCTTTTTCTA TGAGAGCTTC AACGGCAAGG CGTTCGATGA GGCGGTCGGG 
CGGCATGTGG AGTTCGTGCA GGACAACCAT TCGCGCTCGG CCAAGGGCGT GCTGCGCGGC 
TTGCACTATC AGATCCAGCA GCCCCAGGGC AAGCTGGTGC GCGTGGTGCG CGGCGCGGTG 
TTCGATGTGG CGGTGGACAT CCGCAAATCG TCGCCGACGT TTGGGAAATG GGTGGGGGTG 
GAGCTCAGCG AGGACAACCA CAGGCAGCTG TGGGTGCCTG AGGGGTTTGC GCATGGGTTT 
CTGGTGCTGA GCGAGACGGC AGAGTTCTTG TACAAGACCA CCGACTACTA CGCACCGGCG 
CATGAGCGGT GCATCAAATG GGACGACGCC AAGCTAGGTA TTGCTTGGCC AAGCGTCGGC 
GCTCATCCTC AGTTGTCGGC CAAAGACCAG GCCGGTGCCG CTCTCATCCA AGCTGAAGTC 
TTCAGTTGA
 
Protein sequence
MKATPTAIPE VLVIEPKVFG DARGFFYESF NGKAFDEAVG RHVEFVQDNH SRSAKGVLRG 
LHYQIQQPQG KLVRVVRGAV FDVAVDIRKS SPTFGKWVGV ELSEDNHRQL WVPEGFAHGF 
LVLSETAEFL YKTTDYYAPA HERCIKWDDA KLGIAWPSVG AHPQLSAKDQ AGAALIQAEV 
FS