| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0729 |
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| Symbol | |
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| ID | 7974692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 799924 |
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| End bp | 800616 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791328 |
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| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
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| Protein accession | YP_002942649 |
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| Protein GI | 239813739 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1225] Peroxiredoxin |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACTTT CGCCATCGTC CGACTCGCGT TCCATTCGTG CCGCGCGCCA TGCCCGTGCG
GCCCTCAGCC GCGCCTCGCG CCGCGCCGTG GTGGCGGCCG CCGTGGCGCT CGGCGCCACC
TTCCTGATGG GCAACAATGC CTTCGCCGCG CCCGCCGTGG GCCAGCAGGC GCCCGACTTC
GTTGCGGTGG ACACCAGCGG CGCCAAGCAC AAGCTGTCCG ACTTTGCCGG CAAGTTCGTG
GTGCTCGAGT GGACCAACCC GGGTTGCCCC TTCGTGCGCA AGCACTACAA CAGCGGCAAC
ATGCCCGCCA CGCAGAAGGC CGCCACGGCC CAGGGCGTGG TCTGGCTGTC GGTCAATTCC
ACCGAGCGCG CGGCCAGCGA CTACCTGCAG CCCGCCGCGC TCGACGCCTG GATGAAGTCG
CAGAAGGCCG CGCCCACCGC AGTGCTGATG GACGAGGACG GCGTGATCGG ACAGGCCTAC
GGCGCGCGCA CCACGCCGCA CATTTTCATC ATCGATCCCA AGGGCATGCT GGTGTATGCC
GGCGGCATCG ACAGCATCGC CTCGGCCCGG CCCGACGACA TCAAGAGCGC GACCAACTAC
GTGAACCAGG CGCTCGGCGA AGCCTTCGGC GGCAAGCCGA TCTCGACCGC CTCCACGCGG
CCCTACGGCT GCTCGGTGAA GTACAAGAGC TGA
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| Protein sequence | MSLSPSSDSR SIRAARHARA ALSRASRRAV VAAAVALGAT FLMGNNAFAA PAVGQQAPDF
VAVDTSGAKH KLSDFAGKFV VLEWTNPGCP FVRKHYNSGN MPATQKAATA QGVVWLSVNS
TERAASDYLQ PAALDAWMKS QKAAPTAVLM DEDGVIGQAY GARTTPHIFI IDPKGMLVYA
GGIDSIASAR PDDIKSATNY VNQALGEAFG GKPISTASTR PYGCSVKYKS
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