Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0689 |
Symbol | |
ID | 7974652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 749790 |
End bp | 750512 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644791288 |
Product | dienelactone hydrolase |
Protein accession | YP_002942609 |
Protein GI | 239813699 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.722387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTGAAG TGCCTCGCGC AAAGGAAGCC AAATTGGACC CCCCATCCAG AACCTTCGAG CGCCGCGCGC TCCGCATTCC GCTGCGCTCT TCCGTCACGC TGGAGGCCGA CCTGTGCCTG CCTGCGGCCT CGCGCGGGAT CGTGCTGTTT GCGCATGGCA GCGGCAGCAG CCGCTTCAGC CCGCGCAACC GACAGGTCGC GGAGAGCCTC AACGAGGCGA AGCTGGCCAC GCTGCTCGTC GACCTCCTGA CCTCCGACGA AGAGGCCGTC GACGAGCGCA CGCGCGAGCT GCGCTTCGAC ATCGACATGC TGGCCGACCG GCTCGTCGGC CTGACCGACT GGCTGTGCGA CTACGAGCCC GCCGCGGGCC TGAGGATCGG CTACTTCGGC GCGAGCACCG GTGCGGGTGC CGCGCTGATG GCGGCGGCGC AGCGGCCCGA CGCGGTGCAC GCCGTGGTCT CGCGCGGCGG GCGGCCCGAC CTGGCCGGGC CCGCGCTCGA GCGCGTGCGC GCGCCCACGC TGCTGATCGT CGGCGGCAAT GACGGGCCGG TGATCGACAT GAACTGGCAA GCCCTTGCGG TGCTGCACGG CGAGAAGCGG CTTTCGCTCG TGCCCGGTGC CACGCATCTT TTCGAGGAAC CCGAAGCGCT GGGCGCGGTG TCCAAGCTGG CGCGCGACTG GTTTCGGGAC CATCTCGATC CCTCCAGGAG TACCAAGAAA TGA
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Protein sequence | MCEVPRAKEA KLDPPSRTFE RRALRIPLRS SVTLEADLCL PAASRGIVLF AHGSGSSRFS PRNRQVAESL NEAKLATLLV DLLTSDEEAV DERTRELRFD IDMLADRLVG LTDWLCDYEP AAGLRIGYFG ASTGAGAALM AAAQRPDAVH AVVSRGGRPD LAGPALERVR APTLLIVGGN DGPVIDMNWQ ALAVLHGEKR LSLVPGATHL FEEPEALGAV SKLARDWFRD HLDPSRSTKK
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