Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0661 |
Symbol | |
ID | 7974624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 722888 |
End bp | 723499 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644791264 |
Product | Glutathione S-transferase domain protein |
Protein accession | YP_002942585 |
Protein GI | 239813675 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCTCT ACCACCATCC CCTATCCGGC CACTCGCACC GTGCTCGCCT CTTCCTCAGC CTTGCCGGCG TGGAGCATGA GTTGGTCGAG GTTGACCTCG CGGCCGGTGC GCACAAGAAG CCAGAATTTC TCGCACTGAA TTCACTCGGG CAGGTTCCGG TGCTCGACGA CGATGGCACC GTCGTGGCGG ACTCTAACGC GATCCTCGTC TACCTCGCGA AGAAGCTCGG GCTACACGAC TGGCTGCCGC AGGACCCCGC TGGGTCGGCC GCGGTACAGA AGTGGCTCAG CGTGGCGGCT GGGCAGATCG CCTATGGTCC GGCGGCAGCA AGGCTCATCA CTGTGTTCGG CGCTGACTTT AGGCCCGAGG AAGTTATTGG CCGCGCGCAC GCGATCCTGG CGGTGACCGA AGCACAACTC GCCGACCGTA GCTTCATCGT CGACTCGAAA CCCACCGTGG CGGACGTAGC GTTGTACAGC TACATCGCCC GTGCGCCCGA AGGCAACGTC GACTTGCTGG CCTATCCGAA TGTGCGAGCG TGGCTCGCGC GGATTGAGGC GCTGCCCGGC TTCGTTGAGT TCGGCAAGGC GCCGGTCGGC CTGGCTGCCT GA
|
Protein sequence | MKLYHHPLSG HSHRARLFLS LAGVEHELVE VDLAAGAHKK PEFLALNSLG QVPVLDDDGT VVADSNAILV YLAKKLGLHD WLPQDPAGSA AVQKWLSVAA GQIAYGPAAA RLITVFGADF RPEEVIGRAH AILAVTEAQL ADRSFIVDSK PTVADVALYS YIARAPEGNV DLLAYPNVRA WLARIEALPG FVEFGKAPVG LAA
|
| |