| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0622 |
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| Symbol | |
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| ID | 7973607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 678364 |
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| End bp | 679380 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644791229 |
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| Product | NMT1/THI5 like domain protein |
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| Protein accession | YP_002942550 |
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| Protein GI | 239813640 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTCC TGAAATACGT TCTCGCCGCG GTCGCGGCGG CCCTGGCTCT TGGTGGAGTC
GCGCAAGCCC AGCCGATCGG CGGCGAGAAG GAGATCAAGT TCGCGCTCGA CTTCATTCCC
TTGGGCCGGC ACGCGCCTTG GTACGTGGCC TTGCACAAGG GCTACTTCAA GGAAGAGAAG
CTCAACGTCA GCATCCTCCC CACCAAGGGT ACGGCTGACG CGGTGCGCTA CGTCGAGTCC
GGCCTGGCGG AAATGGGATT CATCGACATT CCCAGCCTGG TGGCCGGGGG CGCGGCGGGC
GCATCGGTGC GCATCGTGGC GGGCGTGTAC CAGAAGGCGC CGTACTGCGT GTTCAGCCTC
GATCCGGGCG CCAACGTCGT GTCGCCCAAG GGCATGGTGG GCCTGGAGGT TGGCTCCAGC
AACGCCTCCT TCATGCCGCG CATTTTTGCC GCCTTCATGA AGATGAACAA ACTCGATCCG
TCGACGCTCA AGATCGTGAA CATCGATGCC GCGGCGCGCG TGCCCATGCT GGTGTCGAAA
AAGGTGCCCG CCATCGACCA GTTCTTGATG GGTGAGCCTT CTATCCGCCG AGCCGTGGGC
AACGCCGGCA CACCCAAGTG CCTGCTGCTA GCCGACCATG GCCTGGACAT TTACGCCAAC
AGCATCGGCG TGAAGGAGGA CTTCCTCAAG AGCAACCCGG AGGCCGTCAA GGGCTTCGTG
CGCGCCGCGA TGCGCGGCTG GAAGGACGCG CTCGCGAACC CGGAAGAGGC CGCGCGTATC
CAGACGCAAT ACCTCAAGGC ACTCGATCCG GCGATCGTCG TGGAGGAGTT GCAGATCCTC
AAGCGCATCG CCCTGACGCC CGATGTCTTG CAGAACGGCT TCGGTACTAT GTCCCGTGAC
AAGCTGCGCC GGACCGTGGA CTTCATCAGT CAGAACATTG AGATCGCTGG CGGCGCGCCC
AACCCGGACC GCCTCTTCGT CGACGGATTC CTGCCGACGA CCCCCATCAA ACCCTGA
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| Protein sequence | MKVLKYVLAA VAAALALGGV AQAQPIGGEK EIKFALDFIP LGRHAPWYVA LHKGYFKEEK
LNVSILPTKG TADAVRYVES GLAEMGFIDI PSLVAGGAAG ASVRIVAGVY QKAPYCVFSL
DPGANVVSPK GMVGLEVGSS NASFMPRIFA AFMKMNKLDP STLKIVNIDA AARVPMLVSK
KVPAIDQFLM GEPSIRRAVG NAGTPKCLLL ADHGLDIYAN SIGVKEDFLK SNPEAVKGFV
RAAMRGWKDA LANPEEAARI QTQYLKALDP AIVVEELQIL KRIALTPDVL QNGFGTMSRD
KLRRTVDFIS QNIEIAGGAP NPDRLFVDGF LPTTPIKP
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