| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0591 |
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| Symbol | |
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| ID | 7973575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 650171 |
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| End bp | 651499 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644791198 |
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| Product | sun protein |
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| Protein accession | YP_002942520 |
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| Protein GI | 239813610 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACCTC CGCTGTGGCG CCAGCTGCAG CTGACCGCAG CGGCGCTCGC GTCGATTCGC
GCCGGCAGCT CGGGCACCGT CGCGTTCGAA GCCGTCGAGC CCGCCATGCG CCCCGGCGTG
CAGGCGCTCG GCTTCCAGGT GCTGCGCTGG CTCGGCCGCG CCGAGGCCCT GCGCCGCCAC
CTGGCCAAGC GCACGCCGCC GCCGTTGCCC GACGCGCTCC TGTGCACCGC ATTGGCACTG
GCCTGGGATG CGCAGCACGC GCCCTACGAG CCCTTCACGC TGGTCGACCA GGCCGTCGAG
GCGGCAAAGC GCAACCCCGC CACGCGCGCG CAAGCGAGCT TCATCAACGC CTGCCTGCGC
CGCTTCCTGC GCGAGCGCGA CGAGCTCGTG GCCGCCACCG ACCATGAGCC GGTCGCACAG
TGGAACCATC CGCGCTGGTG GATCGAGCGG CTGAAGCGCG ACCACCCGCG CGATTGGCAG
CGGGTGCTTG CCGCCGACAA CGCGCAGCCG CCGATGACGC TGCGCGTCAA CCTGCGCAAG
ACCACCGTGG CTTCCTATCA GCTGGCGCTC CAGGCGGTGG GCCTTACGGC CGTCCGGGTG
GGGGAGGCGG GCCTGCAGCT GGCGCGCGCC CGCCCGGTGC AGCAGCTGCC CGGTTTTGCC
GACGGCGAAT GCTCGGTGCA GGACGCCGCC GCGCAGCTGG CGGCGCCGCT GCTGCTCGAA
GGCCTGCTGC CCGCGGCCGG CGCGGCCCCC CTGCGCGTGC TCGACGCCTG CGCCGCTCCC
GGCGGCAAGA CCGCGCACCT GCTGGAATTT GCCGGGCCGG CGGCCATCGA GGTGACGGCG
CTCGAGGTCG ATGCCGCCCG CAGCCGCCGC ATCGACGAAA CCCTGGGCCG GCTCGGCCTG
TCCGCCAGGG TGGTGGTGGC CGACGCCGCG CGGCCGGCCG CCTGGTGGGA CGGCACGCCC
TTCGACGCCA TCCTGCTCGA TGCGCCGTGC ACCGCCTCGG GCATCGTCCG GCGCCATCCC
GATGTGCGCT GGCTGCGCCG CGAGAGCGAC ACCGCCCAGC TGGCGGTCCA GCAGGCGGCG
CTGCTCGCGG CCCTCTGGCC CCTGGTCCGG CCCGGCGGCC GGCTGCTCTA CTGCACCTGT
TCCGTCTTCC GGGAAGAAGG CTCGCAACAA ATCGATGCGT TCCTTGCGCA CAACACCGAC
GCCCGATTGG GGGCATCGCC GGGCCATTTG CTTCCCCAAA GCGGGGCGAA TGCCCGCGCC
GTCCCGGACA ATCCCTCAGG TGACCACGAC GGCTTCTTCT ACGCCCTGCT TGAAAAACGT
CCGCGCTGA
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| Protein sequence | MQPPLWRQLQ LTAAALASIR AGSSGTVAFE AVEPAMRPGV QALGFQVLRW LGRAEALRRH
LAKRTPPPLP DALLCTALAL AWDAQHAPYE PFTLVDQAVE AAKRNPATRA QASFINACLR
RFLRERDELV AATDHEPVAQ WNHPRWWIER LKRDHPRDWQ RVLAADNAQP PMTLRVNLRK
TTVASYQLAL QAVGLTAVRV GEAGLQLARA RPVQQLPGFA DGECSVQDAA AQLAAPLLLE
GLLPAAGAAP LRVLDACAAP GGKTAHLLEF AGPAAIEVTA LEVDAARSRR IDETLGRLGL
SARVVVADAA RPAAWWDGTP FDAILLDAPC TASGIVRRHP DVRWLRRESD TAQLAVQQAA
LLAALWPLVR PGGRLLYCTC SVFREEGSQQ IDAFLAHNTD ARLGASPGHL LPQSGANARA
VPDNPSGDHD GFFYALLEKR PR
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