Gene Vapar_0583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0583 
Symbol 
ID7973567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp637609 
End bp638220 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content61% 
IMG OID644791190 
ProductNusG antitermination factor 
Protein accessionYP_002942512 
Protein GI239813602 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACG ACGTAGTTGA AACCACGCCG AGCAGCCCCG AGGAAGAAAA CACCTCCGTG 
CTGGCTCCCG CCGCCAACCC CGATCTGCGT TGGTACGTGG TGCATGCCTA TTCGGGCATG 
GAAAAGGCCG TCGAGCGCAA CATCATCGAG CGCATCAACC GTGCCGGCAT GCAGGACAAG 
TTCGGCCGCA TCCTGGTGCC GACCGAAGAA GTGGTCGAAA TCAAGAACGG CCAGAAGCGC 
ACCACCGAGC GCCGCTTCTT CCCGGGCTAC GTGCTGGTCG AAATGATCAT GGACGACGAG 
AGCTGGCACC TGGTGAAGCA CACCAACAAG GTGACGGGCT TCGTTGGCGG CGCCAAGAAC 
CGTCCGGCCC CGATCTCGCA GAAAGAGGTC GAAGGCATCG TCAGCCAGAT GCAGCAGGGC 
ACCGAGAAGC CGCGCCACAA GGTCGAGTTC ACCGTCGGCG AATTCGTGCG CGTCAAGGAA 
GGCCCGTTCA CCGACTTCAA CGGCACCGTC GAGGAAGTCA ACTACGAGAA GAGCAAGGTC 
AGCGTGTCGG TCATGATCTT CGGCCGCGCG ACACCCGTGG AGCTCGAGTT CAGCCAGGTC 
GAGAAGACCT GA
 
Protein sequence
MTDDVVETTP SSPEEENTSV LAPAANPDLR WYVVHAYSGM EKAVERNIIE RINRAGMQDK 
FGRILVPTEE VVEIKNGQKR TTERRFFPGY VLVEMIMDDE SWHLVKHTNK VTGFVGGAKN 
RPAPISQKEV EGIVSQMQQG TEKPRHKVEF TVGEFVRVKE GPFTDFNGTV EEVNYEKSKV 
SVSVMIFGRA TPVELEFSQV EKT