Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0537 |
Symbol | |
ID | 7972947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 597893 |
End bp | 598375 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644791140 |
Product | hypothetical protein |
Protein accession | YP_002942466 |
Protein GI | 239813556 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGCA GGGATCTGAT CGAAGCGCAA TTGCAGGTGG CCACGGCCAC CATGACGTGG AATGCCGTGG CGACGGGCGA ACTCGTCGCC ATCACTGACG AGGGATGCAC GCCCCTTGTC GTGTTCCCGG GCCAGCCTGG CACCGCGGCC GTGCGCGCGC GCAGCGTGGT CGATCTGCAT GGCGTGCACA TCGGCCGGCA GGTCGTGCTG ATGTTCGAGG CGGCAGACCC GGCCCGGCCC GTCGTGATGG GCGTGCTGCG CAGCGGGGAC GGATCGCCCT TGCCCGCGAT GCCACCGCAG GTCGATGTGG AGGCTGACGG CAGCCGGATC GCCGTGAGTG CGAAGGAGCA GCTCGTGCTG CGGTGTGGCA AGGCCAGCAT CACGCTCACC AAGGCCGGCA AGGTGCTGAT CCAGGGCAGC TATGTGTCGA GCCGTTCGAC GGGTGTCAAT CGCATCAAGG GCGGTTCGGT GCAACTGAAC TGA
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Protein sequence | MSGRDLIEAQ LQVATATMTW NAVATGELVA ITDEGCTPLV VFPGQPGTAA VRARSVVDLH GVHIGRQVVL MFEAADPARP VVMGVLRSGD GSPLPAMPPQ VDVEADGSRI AVSAKEQLVL RCGKASITLT KAGKVLIQGS YVSSRSTGVN RIKGGSVQLN
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