Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0501 |
Symbol | |
ID | 7972911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 540697 |
End bp | 542883 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644791104 |
Product | Catalase |
Protein accession | YP_002942430 |
Protein GI | 239813520 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase [COG0753] Catalase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCCTC AGAACAAGGC CGCCGCCGGA CGCCGCTCGA AGGCCACGGA CGGCAGCAAC GCCAAGCAGC AGCAGCTCGA TGGATTCGCA ACCGATCATG CGCCCAATCT GACGACCAAC CAGGGTCTTC AGATCCCCGA CAACCACAAT TCGCTCAAGG CCGGGGTGCG CGGGCCCACG CTGCTCGAAG ATTTCATCCT GCGCGAGAAG ATCACGCACT TCGACCACGA GCGCATCCCG GAGCGCGCGG TGCATGCGCG CGGCTCGGCG GCGCATGGCT ATTTCCAGGT CTACAAGTCG ATGTCGCAGT TCACCTGCGC CGACTTCCTG CAGGACCCGG ACGCAAAGAC GCCCGTTTTC GTGCGCTTTT CCACCGTGGC CGGCTCGCGC GGCTCGGCCG ACACGGTGCG CGACGTGCGC GGCTTTGCCG TCAAGTTCTA CACCCGCGAG GGCAACTACG ACCTCGTGGG CAACAACATC CCGGTGTTCT TCATCCAGGA CGCGATGAAG TTTCCCGACC TGATCCACGC CGTCAAGCCC GAGCCGCACC ACGAGATGCC GCAGGCCGCC AGCGCGCACG ACACCTTCTG GGATTTCGTC TCGCTCATGC CCGAGAGCAC CCACATGCTG ATGTGGGCGA TGAGCGACCG CGCCATCCCG CGCAGCCTGC GCATGATGGA AGGCTTCGGC GTGCACACCT TCCGCTTCGT CAACCTGCGC GGCGAGAGCC ACTTCGTGAA GTTCCACTGG AAGCCCAAGC TCGGCATCCA TGGCCTCGCA TGGGACGAGG CACAGAAGGT CGCGGGCAAG GACCCCGACT TCCACCGCCG CGACCTGTGG GAGGCGATCG AGCAGGGCGA CTTTCCCGAG TGGGAGCTCG GCGTGCAGCT GGTGCCGCCC GACAAGGCCG ATTCGCTCGG CTTCGACCTG CTCGACCCCA CCAAGCTGAT CCCCGAGGAG ATGGTGCCCG TGCAGCGCAT CGGCCGGCTG GTGCTCAACC GCAACCCCGA GAACTTCTTT GCCGAGACCG AGCAGGTGGC CTTCCACCCG GGGCACGTGG TGCCCGGCAT CGACTTCAGC AACGACCCGC TGCTGCAGGG GCGCCTGTTC TCCTATACCG ACACGCAGAT CTCGCGCCTG GGCGGGGCCA ACTTCCACGA GCTGCCCATC AACAAGAGCG TGTGCCCGTT CCACAACTTC CAGCGCGACG GCATGCACCG CCAGACCATC GCGCGCGGCC AGGTGGCCTA CGAGCCCAAC TCGCTCGGCG ACGGCAAGGA GTTCAGGGTG GACGGCGGCA GCGTCGGCTT CCAGCCGCAT CCCGACGAGC TCGAGTCGCC CAAGGTGCGC CGGCGCAGCC CGAGCTTCGA CGACCACTTC ACGCAGGCGC GGCTGTTCTT CAACAGCCAG AGCGCGGCCG AGAAGGAGCA CATCGTTGCG GCCTTCCGCT TCGAGCTTTC GAAGGTCGAC GTGCCGGCCA TCCGCCAGCG CATGGTCGAC AACCTGGCGC ACGTCGACGA GAAGCTCGCG CGCCGCGTGG CCGAGCCGCT GGGCATCGGC GCGCCGGACG CCAAGGCGGC CGCGGGCCGC GCGGGCTACC GCGAGCACCG CATGACCCTG CCCATCGAGG AGTCGCCCGC GCTCAGCATG GCCGACAGCG GCGACGGCTC GATCCGCACG CGAAAGATCG CGATCCTCGC GGCCGACGGC ATCGACTCCG CCTCGCTCAA GCCGATCCGC GATGCGCTCG AGCAGGCCGG CGGCAAGTGC AAGGTGGTGG GCGCCCGCCT GGGCACCATC GCCAGCGCAT CGAAGCGGCA GATCGACGTC GACATGACCT TCGCCAACGG GCCGTCGGTC GTGTTCGATG CCGTGCTGAT CCCCGGCGGC GCCCAGGGCG TGGCGGCGCT GGCGGGCATG GGCGATGCGG TGCACTTCGT GCTTGAGGCG TACAAGCACT GCAAGGCCAT CTGCACCGTG GGCGACGGCG TGCAGCTGCT CTCCACGCTC GGCATCGGCG CCAACGCGCA GCAGGGCGAT GCGCCCGCCG GCATCATCGT GGCGGCCACG CCGGTCACCA ACCTCGGCGA CACCAGCGAG GCGACGCAGA TCGCGCAGGC CTTCATCGCC GCGATTGCCA GGCACCGCCA CTGGGACCGC GCCAACATCG ATGCGATTCC CGCCTGA
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Protein sequence | MTPQNKAAAG RRSKATDGSN AKQQQLDGFA TDHAPNLTTN QGLQIPDNHN SLKAGVRGPT LLEDFILREK ITHFDHERIP ERAVHARGSA AHGYFQVYKS MSQFTCADFL QDPDAKTPVF VRFSTVAGSR GSADTVRDVR GFAVKFYTRE GNYDLVGNNI PVFFIQDAMK FPDLIHAVKP EPHHEMPQAA SAHDTFWDFV SLMPESTHML MWAMSDRAIP RSLRMMEGFG VHTFRFVNLR GESHFVKFHW KPKLGIHGLA WDEAQKVAGK DPDFHRRDLW EAIEQGDFPE WELGVQLVPP DKADSLGFDL LDPTKLIPEE MVPVQRIGRL VLNRNPENFF AETEQVAFHP GHVVPGIDFS NDPLLQGRLF SYTDTQISRL GGANFHELPI NKSVCPFHNF QRDGMHRQTI ARGQVAYEPN SLGDGKEFRV DGGSVGFQPH PDELESPKVR RRSPSFDDHF TQARLFFNSQ SAAEKEHIVA AFRFELSKVD VPAIRQRMVD NLAHVDEKLA RRVAEPLGIG APDAKAAAGR AGYREHRMTL PIEESPALSM ADSGDGSIRT RKIAILAADG IDSASLKPIR DALEQAGGKC KVVGARLGTI ASASKRQIDV DMTFANGPSV VFDAVLIPGG AQGVAALAGM GDAVHFVLEA YKHCKAICTV GDGVQLLSTL GIGANAQQGD APAGIIVAAT PVTNLGDTSE ATQIAQAFIA AIARHRHWDR ANIDAIPA
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