| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0496 |
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| Symbol | |
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| ID | 7972906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 536350 |
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| End bp | 537357 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644791099 |
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| Product | Succinylglutamate desuccinylase/aspartoacylase |
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| Protein accession | YP_002942425 |
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| Protein GI | 239813515 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3608] Predicted deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTCCG ATCCCCTTGC CGCCGCCACC ACCGACAACC TGCGCATCCA CACCTTCGCC
GCGCTGGAGC CGGGCCCGCG GCTGCTCGTG ATGGGCGGCG TGCATGGCGA CGAGACCTGC
GGCACCGCGG GCATCGAGCG CGTGCTGGCC GAGCTCGATG GCGGCACCTT CCGGCTGCGG
CGCGGCCAGC TCACGCTGGT GCCGGTCGCC AACCCGCTGG CGCGGCGGCG CCTGCAGCGC
GAGGGCGAGC GCAACCTCAA CCGCCTGTTC AAGCCGAGCG CGGCGCCCGC GGACTACGAA
GACCGGGTCA CCAACGTGCT GTGCCCCATC ATCGAGCGGC ACGACGTGCT GCTCGACCTG
CATTCCTTCC AGAGCGAGGG CGAGGCCTTC GCGATGATCG GCCCGCGCGA CAACACCGGC
ACGCTCGAGC CCTTTGCGCG CGCCAGCGAG GAAGGGCTGC TGGCGCTGCA CCTGGGCACG
CCGATCGTGG TGGAGGGCTG GCTCGACATC TATGCCGCCG GGCTCGCGCA GCGCGCCGCG
GGCATCGCGG TGGGCGAGGA CGCGATCGAC TTCGGCCGCG GCACCAACGA ATACATCCGC
AATTGCGGCG GCTACGGCGT CACGCTCGAA TGCGGCCAGC ACCGCGACCC GAAGGCGCCC
GAGGTGGCCT GGCGCGCCAT CCGCCGCGCG CTCGCGCTGC TCGGCATGGC GGCGCTGCCC
CAGGGCCTGG CGGGTACGCC GCCCGCGCCG CCCCGGCTGC TGCGGCTGGC GAGCGTGACC
GACCGCCTGC ACGAGGACGA CAGCTTCGTG CGCGACTGGG CCACCTTCGA CGCGGTGCAG
CGCGGCGAAC CCATCGGCAT GCGCCACGAC GGCACGCTGG TGAGCGCGCC GGACGACGGC
TTCATCGTCT TTCCCAACGC GCTGGCGCTG CCCGGCGCCG AATGGTTCTA CTTCGCGCGC
CCGAGCGAGC GCGTGCTCGG GTCCGTGGCC GCCGTCCGCG CCGCCTGA
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| Protein sequence | MSSDPLAAAT TDNLRIHTFA ALEPGPRLLV MGGVHGDETC GTAGIERVLA ELDGGTFRLR
RGQLTLVPVA NPLARRRLQR EGERNLNRLF KPSAAPADYE DRVTNVLCPI IERHDVLLDL
HSFQSEGEAF AMIGPRDNTG TLEPFARASE EGLLALHLGT PIVVEGWLDI YAAGLAQRAA
GIAVGEDAID FGRGTNEYIR NCGGYGVTLE CGQHRDPKAP EVAWRAIRRA LALLGMAALP
QGLAGTPPAP PRLLRLASVT DRLHEDDSFV RDWATFDAVQ RGEPIGMRHD GTLVSAPDDG
FIVFPNALAL PGAEWFYFAR PSERVLGSVA AVRAA
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