| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0465 |
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| Symbol | |
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| ID | 7970206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 507476 |
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| End bp | 508270 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791068 |
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| Product | ABC transporter related |
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| Protein accession | YP_002942394 |
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| Protein GI | 239813484 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.15337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCGAAG CCGCTGGAAC CCAGAACGCC GACGGCACGC CGGGCAGCCG CCTGGTGGTG
CGCGGCCTGC AGAAGAGCTA CGGCAGCCGC AAGGTCGTGC GGGACGTCTC GCTCGACGTA
CAAAAGGGCG AAGTCGTCGG GCTGCTCGGC CCCAACGGCG CCGGCAAGAC CACCTCGTTC
TACATGATCG TGGGGCTGGT GCGGGCCGAT GCGGGCGAGA TCACCATCGA CGGCGAGCCC
ATCGCCCACA TGCCGATCCA CCGGCGCGCG CGCATGGGCC TGAGCTACCT GCCGCAGGAA
GCCTCCATCT TCCGCAAGCT CACGGTCGAG GAAAACGTGC GCGCCGTGCT CGAGCTCCAG
CGCGAGCCCG ACGCCGGCGG CAAGCCCGCG CCACTGACCA AGCAGCGCAT CGAGGAGCGC
CTCTCGGGCC TTTTGGCCGA CCTGCGGGTG GACCATCTTC GCGATTCGCC CGCGCTCGCG
CTCTCGGGCG GCGAACGGCG CCGGGTCGAG ATCGCCCGCG CGCTGGCCAC GCAGCCGCGC
TTCATCCTGC TGGACGAGCC CTTTGCCGGC ATCGACCCGA TCGCGGTGAT CGAGATCCAG
CGGATCATCA GCTTCCTGAA GGAGCGCGGC ATCGGCGTGC TCATCACCGA CCACAACGTG
CGTGAAACGC TGGGCATCTG CGATCACGCG TTCATCATCA GCGACGGGCA TGTGCTGGCA
CAAGGCACAC CCTCGGAGAT CGTCGACAAC GCCGAAGTAC GCAGGGTGTA CCTCGGCGAG
CACTTCCGGA TGTAA
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| Protein sequence | MIEAAGTQNA DGTPGSRLVV RGLQKSYGSR KVVRDVSLDV QKGEVVGLLG PNGAGKTTSF
YMIVGLVRAD AGEITIDGEP IAHMPIHRRA RMGLSYLPQE ASIFRKLTVE ENVRAVLELQ
REPDAGGKPA PLTKQRIEER LSGLLADLRV DHLRDSPALA LSGGERRRVE IARALATQPR
FILLDEPFAG IDPIAVIEIQ RIISFLKERG IGVLITDHNV RETLGICDHA FIISDGHVLA
QGTPSEIVDN AEVRRVYLGE HFRM
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