Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0444 |
Symbol | |
ID | 7970185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 485674 |
End bp | 486480 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644791047 |
Product | Enoyl-CoA hydratase/isomerase |
Protein accession | YP_002942373 |
Protein GI | 239813463 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCAC CGCAGCCCTA TGTGCTCTAC GCGCTGGCCG ACGGCATCGC CACGCTCACG CTCAACCTGC CGGCCAAGCT GAATCCGATT GCGCGCGAGC TGCAGGTCGA GCTGCGCGAC ACGCTGGAGC GCATCCGCGA CGACCGCGCG GTGCGCGCCG TGATCCTGAC CGGTGCCGGC AAGGCCTTCT GCGTGGGCGC CGATTTGAGC GCGATGGCGC CAGGCGACGA AGGCAAGTCG CTCGGCGCGC AGACCGCGGA GTGGATGCAA TCGCTCAGCA ACCCGCTGAT CGAGACGCTG CGCACGCTGC CCGTGCCGGT GGTGGCGGCC GTCAACGGCG CCGCGGCCGG CGCCGGCGTG GGCCTGGCGC TGGCGGCCGA TGTGACGATC GCGGCGCGCA GCGCCTACTT CTACCTGTCC TTCCTGCCCA AGCTCGGCAT CGTGCCGGAC CTGGGCTGCA CCTGGGCCAT TCCGCGGCGC GCCGGCCGGG CACGCGCGAT GGGCATGGCG CTGCTCGACG AGCGCCTGGG CGCCGAGCAG GCGGTGCAAT GGGGCCTGAT CTGGGCCTGC GCGGACGACG AACAGCTGCT CGACGAAGCG CGCGCCATCG CACAGCGGCT CGCCCGGCTG CCGGCGCATG CGGTGGTCGA GGCGCGCGAA GCCTTCGAGG CCGCCGAGCG CCACACGCTG GCCGAGCAAT TGCACTACGA AAGCGAGCGC CAGCGCGAAC TGATCGACCG CCCCACCTTC CGCGAAGGCG TGAGCGCCTT CCTGCAGAAG CGTCCGCCAC GCTTCCCCGG GCGCTGA
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Protein sequence | MNAPQPYVLY ALADGIATLT LNLPAKLNPI ARELQVELRD TLERIRDDRA VRAVILTGAG KAFCVGADLS AMAPGDEGKS LGAQTAEWMQ SLSNPLIETL RTLPVPVVAA VNGAAAGAGV GLALAADVTI AARSAYFYLS FLPKLGIVPD LGCTWAIPRR AGRARAMGMA LLDERLGAEQ AVQWGLIWAC ADDEQLLDEA RAIAQRLARL PAHAVVEARE AFEAAERHTL AEQLHYESER QRELIDRPTF REGVSAFLQK RPPRFPGR
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