| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0422 |
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| Symbol | |
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| ID | 7970163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 459022 |
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| End bp | 461652 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791025 |
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| Product | leucyl-tRNA synthetase |
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| Protein accession | YP_002942351 |
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| Protein GI | 239813441 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0495] Leucyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCCA GCTACAAACC CAGCGACGTC GAGTCCGCTG CCCAGGCGCA ATGGAGCGCC
GCCGATGCCT ACCGCGTCAC CGAGGACGCG AGCCGTAAAA AGTACTACGC CTGCTCGATG
CTGCCGTACC CGAGCGGCAA GCTGCACATG GGCCACGTGC GCAACTACAC CATCAACGAC
ATGCTCACGC GCTACCTGCG CATGAGCGGC TACAACGTGC TGATGCCCAT GGGCTGGGAC
GCCTTCGGCC TGCCGGCCGA GAACGCGGCG CTGAAGAACG GCGTGCCGCC GGCCAAGTGG
ACCTACGAGA ACATCGACTA CATGCGCGGC CAGCTCCAGG CCATGGGCCT GGCAATCGAC
TGGAGCCGCG AGATCGCCAC CTGCGATCCC AGCTACTACA AGTGGAACCA GTGGCTGTTC
CTCAAGATGC TCGAAAAGGG CATTGCCTAC CGCAAGACGC AGGTCGTCAA CTGGGACCCG
GTCGACCAGA CCGTGCTGGC CAACGAGCAG GTGATCGACG GCAAGGGCTG GCGCACCGGC
GCCACGGTCG AGCGCCGCGA GATCCCGGGC TACTACCTGA AGATCAGCGA CTACGCCGAA
GAGCTGCTCG AGCACACGCA GCACAAGCTG CCGGGCTGGC CCGAGCGCGT CAAGCTGATG
CAGGAGAACT GGATCGGCAA GAGCGAGGGC GTGCGCTTCG CCTTCACGCA CGACATCCAG
GACGCGAGCG GCCGGCTGAT CCAGGACGGC CGCATGTACG TGTTCACCAC GCGCGCCGAC
ACCATCATGG GCGTCACTTT CTGCGCCGTA GCGCCCGAGC ATCCGCTGGC CGCGCACGCC
GCCACGCTCG ACCCCAAGGT CGCGGCCTTC ATCGAGGAAT GCAAGAGCGG CGGCACCACC
GAGGCCGAGC TCGCCACGCA GGAAAAGAAG GGCGTGCCCA CGGGCCTGAC CGTCAAGCAC
CCGATCACCG AGGAGCAGGT GCCGGTGTGG GTGGGCAACT ACGTGCTCAT CAACTACGGC
GACGGCGCCG TGATGGGCGT GCCCGCGCAC GACGAGCGCG ACTTCGCCTT CGCCAACAAG
TACGGCATCG AGATCATCCA GGTGGTGCTG GTCGACGACG AGCCGCACTT CGACTATCAC
AGGTGGCAGG ACTGGTACGG CGACAAGCAG CGCGGCGTCA CCATCAACTC CGACAACTTC
AGCGGCATGA CCCACAAGGA GGCCGTGGCC GCCGTGGCGC ATGCGCTCGC CCAGAAGGGC
CTGGGCGAGA TGCAGACCAC CTGGCGCCTG CGCGACTGGG GCGTGAGCCG CCAGCGCTAC
TGGGGCACGC CGATCCCGAT CATCCATTGC GACGAGCATG GCGCGGTGCC GGTCCCCGAG
AAGGACCTGC CCGTGGTGCT GCCGACGGAC TGCGTGCCCG ACGGTTCGGG CAACCCGCTC
GCCAAGCACG AAGGCTTCCA TGCCGGCGTG GTGTGCCCGG TCTGCGGCAA GCCCGCGCGG
CGCGAGACCG ACACCATGGA CACCTTCGTC GACAGCTCGT GGTACTTCAT GCGCTACTGC
GACCCGAAGA ACGAGCAGGC CATGGTCGCC GAGGGCGCCG ACTACTGGAT GCCGATGGAC
CAGTACATCG GCGGCATCGA GCATGCGATC CTTCACCTGC TGTACGCGCG CTTCTGGACC
AAGGTGATGC GCGACCTGGG CCTCGTGAAG GTCGACGAGC CCTTCAGCAA GCTGCTCACG
CAGGGCATGG TGCTCAACCA CATCTACTAC CACCGCGACG AGAAGGGCGG CAAGAACTAC
CACCCGCCGC TGGAGGTCAC GCCCACGCTC GACGCGCAGG GCCGCATCGT CGGCGGCACC
ACCGCGGACG GCACCAAGAT CGAATACGGC GGCGTCGGCA AGATGGGCAA GAGCGAACGC
AACGGCGTCG ACCCGCAGGA CCTGATCGAG AAGTACGGCG CCGACACCGC GCGCCTGTAC
ACCATGTTCA CCGCACCGCC CGAGGCCACG CTCGAGTGGA ACGACGCGGC CGTCGAAGGC
AGCTACCGGT TCCTGCGCCG GGTCTGGAAC TTCGGCGTGG CGCAGGCCGA CGTGGCCCCG
GTGGCGTTCG GCGGCCAGGC CTTCGGCAAG GCCGCCCAGG CGCTGCGGCG CGAAGTGCAC
ACCGTGCTGC GCCAGGTCGA CTACGACTAC CAGCGCATGC AATACAACAC CGTGGTCTCA
GGCGCGATGA AGCTCCTGAA TGCGCTCGAA GGCTTCAAGC CCGATGGCAG CGCCGGCGAT
GCCGCCGCGC TGCGCGAAGG CCTGGGCATC CTGCTGCGCT GCCTGTATCC GGCCACGCCG
CACATCACGC ACCAGCTCTG GCAGCATCTG GGCTACGACA AGGAGCTGGG CGACCTGCTC
GATGCGCCCT GGCCCGTGGT GGACGTGGCC GCGCTGGAGC AGGACGAGAT CGAGCTCATG
CTGCAGGTCA ACGGCAAGCT GCGCGGCGCG CTGCGCGTGC CGGCCGGCGC CTCCAAGGCC
GAGATCGAAG CGCTCGCGCT CTCGTGCGAC GACTTCGTCA AGTTCGCCGA AGGCGCGCCG
GCCAAGCGCG TCATCGTGGT TCCCGGCCGG CTGGTCAACG TGGTCATCTG A
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| Protein sequence | MNPSYKPSDV ESAAQAQWSA ADAYRVTEDA SRKKYYACSM LPYPSGKLHM GHVRNYTIND
MLTRYLRMSG YNVLMPMGWD AFGLPAENAA LKNGVPPAKW TYENIDYMRG QLQAMGLAID
WSREIATCDP SYYKWNQWLF LKMLEKGIAY RKTQVVNWDP VDQTVLANEQ VIDGKGWRTG
ATVERREIPG YYLKISDYAE ELLEHTQHKL PGWPERVKLM QENWIGKSEG VRFAFTHDIQ
DASGRLIQDG RMYVFTTRAD TIMGVTFCAV APEHPLAAHA ATLDPKVAAF IEECKSGGTT
EAELATQEKK GVPTGLTVKH PITEEQVPVW VGNYVLINYG DGAVMGVPAH DERDFAFANK
YGIEIIQVVL VDDEPHFDYH RWQDWYGDKQ RGVTINSDNF SGMTHKEAVA AVAHALAQKG
LGEMQTTWRL RDWGVSRQRY WGTPIPIIHC DEHGAVPVPE KDLPVVLPTD CVPDGSGNPL
AKHEGFHAGV VCPVCGKPAR RETDTMDTFV DSSWYFMRYC DPKNEQAMVA EGADYWMPMD
QYIGGIEHAI LHLLYARFWT KVMRDLGLVK VDEPFSKLLT QGMVLNHIYY HRDEKGGKNY
HPPLEVTPTL DAQGRIVGGT TADGTKIEYG GVGKMGKSER NGVDPQDLIE KYGADTARLY
TMFTAPPEAT LEWNDAAVEG SYRFLRRVWN FGVAQADVAP VAFGGQAFGK AAQALRREVH
TVLRQVDYDY QRMQYNTVVS GAMKLLNALE GFKPDGSAGD AAALREGLGI LLRCLYPATP
HITHQLWQHL GYDKELGDLL DAPWPVVDVA ALEQDEIELM LQVNGKLRGA LRVPAGASKA
EIEALALSCD DFVKFAEGAP AKRVIVVPGR LVNVVI
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